Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV19A0A0A6YYK7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV19A0A0A6YYK7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV19A0A0A6YYK7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV19A0A0A6YYK7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV19A0A0A6YYK7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TRAV19A0A0A6YYK7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV19A0A0A6YYK7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV19A0A0A6YYK7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV19A0A0A6YYK7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV19A0A0A6YYK7 LINC00602-201ENST00000629776 2065 ntBASIC18.85■□□□□ 0.61
TRAV19A0A0A6YYK7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 AC104692.2-201ENST00000603054 253 ntBASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 AL121912.1-201ENST00000603683 238 ntBASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
TRAV19A0A0A6YYK7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV19A0A0A6YYK7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV19A0A0A6YYK7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV19A0A0A6YYK7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV19A0A0A6YYK7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 SAPCD2P3-201ENST00000455031 850 ntBASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 AC009078.2-202ENST00000463353 338 ntBASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV19A0A0A6YYK7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 AKR1C7P-201ENST00000305623 895 ntBASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 MTCL1P1-201ENST00000446207 792 ntBASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 AL591684.3-201ENST00000605187 298 ntBASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 AC114341.1-201ENST00000618070 349 ntBASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 REXO1L6P-202ENST00000619970 1078 ntBASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV19A0A0A6YYK7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms