Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
TRAV27A0A087WT01 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 GNAS-203ENST00000306120 1878 ntBASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 FLJ13224-201ENST00000313737 1514 ntBASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 SLC25A1P2-201ENST00000430693 912 ntBASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 AL353719.1-201ENST00000566847 864 ntBASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 CR769767.2-201ENST00000622735 460 ntBASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV27A0A087WT01 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 MIR149-201ENST00000384879 89 ntBASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 MIR718-201ENST00000390190 70 ntBASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 MIR4785-201ENST00000585005 73 ntBASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV27A0A087WT01 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 HOXB1-202ENST00000577092 1414 ntBASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 TSPY17P-201ENST00000450329 467 ntBASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 OR6D1P-202ENST00000641007 5290 ntBASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV27A0A087WT01 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms