Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
IGKV2-28A0A075B6P5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
IGKV2-28A0A075B6P5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
IGKV2-28A0A075B6P5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
IGKV2-28A0A075B6P5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
IGKV2-28A0A075B6P5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
IGKV2-28A0A075B6P5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 AC008687.6-201ENST00000596318 630 ntBASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 AC083880.1-201ENST00000608266 535 ntBASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 KRT8P45-201ENST00000414328 1447 ntBASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
IGKV2-28A0A075B6P5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
IGKV2-28A0A075B6P5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
IGKV2-28A0A075B6P5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 AP001094.4-201ENST00000579008 2176 ntBASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 PRKY-204ENST00000533551 1019 ntBASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 AL109923.1-201ENST00000618799 583 ntBASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 AL121829.2-201ENST00000620908 328 ntBASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 AL139384.1-201ENST00000612143 3047 ntBASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.08□□□□□ -0.48
IGKV2-28A0A075B6P5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
IGKV2-28A0A075B6P5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
IGKV2-28A0A075B6P5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
IGKV2-28A0A075B6P5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
IGKV2-28A0A075B6P5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
IGKV2-28A0A075B6P5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
IGKV2-28A0A075B6P5 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms