Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 UPK3BP1-201ENST00000428678 509 ntBASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 MIR3180-1-201ENST00000580374 94 ntBASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 MIR3180-3-201ENST00000584616 94 ntBASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 AL121672.3-201ENST00000608644 468 ntBASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
CLDN16Q9Y5I7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 AL845331.1-201ENST00000424978 1190 ntBASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 ATP5G2P1-201ENST00000433580 426 ntBASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 TSSC2-201ENST00000450217 709 ntBASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 AC069148.1-201ENST00000608741 768 ntBASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CLDN16Q9Y5I7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 NEFHP1-201ENST00000412845 2629 ntBASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 AC135050.7-201ENST00000624508 2218 ntBASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN16Q9Y5I7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 CHCHD2P8-201ENST00000429873 447 ntBASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 BX276092.5-203ENST00000456199 560 ntBASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 AL353801.3-201ENST00000609898 542 ntBASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 AL354751.1-201ENST00000412768 1863 ntBASIC16.95■□□□□ 0.3
CLDN16Q9Y5I7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms