Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA1Q9Y5H4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHGA1Q9Y5H4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA1Q9Y5H4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA1Q9Y5H4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHGA1Q9Y5H4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA1Q9Y5H4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGA1Q9Y5H4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA1Q9Y5H4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA1Q9Y5H4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 AC011467.2-201ENST00000598425 242 ntBASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA1Q9Y5H4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 AP005117.1-201ENST00000584346 1413 ntBASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 AC104109.2-201ENST00000602919 1418 ntBASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 AL138831.2-201ENST00000606564 490 ntBASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 AL691403.2-201ENST00000618460 490 ntBASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 AC009154.2-201ENST00000621177 724 ntBASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 HLA-J-201ENST00000462773 1622 ntBASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 PCDHAC2-203ENST00000615316 3011 ntBASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA1Q9Y5H4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA1Q9Y5H4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA1Q9Y5H4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA1Q9Y5H4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA1Q9Y5H4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA1Q9Y5H4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA1Q9Y5H4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA1Q9Y5H4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms