Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 AL121894.2-201ENST00000602977 491 ntBASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 AL691432.3-201ENST00000621860 400 ntBASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 AC233702.3-201ENST00000578656 1387 ntBASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00588Q9Y4M8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 AP000974.1-201ENST00000623909 2387 ntBASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 LINC00167-201ENST00000530583 1419 ntBASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 AC011840.4-201ENST00000578471 627 ntBASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 AC126763.1-201ENST00000552015 2118 ntBASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 CROCCP3-202ENST00000420820 1947 ntBASIC12.49□□□□□ -0.41
LINC00588Q9Y4M8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 LINC01126-201ENST00000623515 1646 ntBASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 TSPY12P-201ENST00000421279 868 ntBASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms