Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA7Q9UN72 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHA7Q9UN72 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 INGX-201ENST00000359239 846 ntBASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 MIR718-201ENST00000390190 70 ntBASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 AL355075.4-201ENST00000554988 638 ntBASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA7Q9UN72 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 AL024508.2-201ENST00000607749 1894 ntBASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 AC112497.1-201ENST00000624824 639 ntBASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 AC116562.4-202ENST00000641738 218 ntBASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PCDHA7Q9UN72 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.77■□□□□ 0.91
PCDHA7Q9UN72 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHA7Q9UN72 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.77■□□□□ 0.91
PCDHA7Q9UN72 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHA7Q9UN72 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHA7Q9UN72 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 AC006116.8-202ENST00000587620 1550 ntBASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA7Q9UN72 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA7Q9UN72 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA7Q9UN72 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA7Q9UN72 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA7Q9UN72 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA7Q9UN72 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHA7Q9UN72 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHA7Q9UN72 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA7Q9UN72 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA7Q9UN72 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms