Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 AL032819.2-201ENST00000624543 2162 ntBASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 AC074051.2-201ENST00000565115 352 ntBASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 AL121912.1-201ENST00000603683 238 ntBASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 AL031008.1-201ENST00000619963 541 ntBASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 AF228730.7-201ENST00000641842 219 ntBASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 AL031284.1-201ENST00000419297 478 ntBASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 AC104819.1-201ENST00000504587 486 ntBASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 AL773604.1-201ENST00000617417 272 ntBASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NOTCH3Q9UM47 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 AC091607.1-201ENST00000490318 1060 ntBASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 AC079602.3-201ENST00000623931 403 ntBASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 AC117500.6-201ENST00000624871 588 ntBASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 AC233702.3-201ENST00000578656 1387 ntBASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.11□□□□□ -0.15
NOTCH3Q9UM47 AL109659.2-201ENST00000606809 1674 ntBASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms