Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 LINC00265-3P-201ENST00000447588 903 ntBASIC19.27■□□□□ 0.68
CDH9Q9ULB4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH9Q9ULB4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH9Q9ULB4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDH9Q9ULB4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH9Q9ULB4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.27■□□□□ 0.67
CDH9Q9ULB4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDH9Q9ULB4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 LINC00602-201ENST00000629776 2065 ntBASIC19.26■□□□□ 0.67
CDH9Q9ULB4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 TOB2P1-201ENST00000469761 992 ntBASIC19.26■□□□□ 0.67
CDH9Q9ULB4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 MIR3652-201ENST00000579335 131 ntBASIC19.26■□□□□ 0.67
CDH9Q9ULB4 CLEC4GP1-201ENST00000596555 870 ntBASIC19.26■□□□□ 0.67
CDH9Q9ULB4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDH9Q9ULB4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 LINC00167-201ENST00000530583 1419 ntBASIC19.25■□□□□ 0.67
CDH9Q9ULB4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 AC009154.2-201ENST00000621177 724 ntBASIC19.25■□□□□ 0.67
CDH9Q9ULB4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH9Q9ULB4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 AC004408.2-201ENST00000623613 2777 ntBASIC19.24■□□□□ 0.67
CDH9Q9ULB4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 AC233702.3-201ENST00000578656 1387 ntBASIC19.24■□□□□ 0.67
CDH9Q9ULB4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 AP000867.3-201ENST00000524675 377 ntBASIC19.24■□□□□ 0.67
CDH9Q9ULB4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH9Q9ULB4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH9Q9ULB4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH9Q9ULB4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH9Q9ULB4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH9Q9ULB4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH9Q9ULB4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH9Q9ULB4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH9Q9ULB4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms