Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 AC010240.3-201ENST00000607688 395 ntBASIC21.01■□□□□ 0.95
DDX41Q9UJV9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX41Q9UJV9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
DDX41Q9UJV9 AC016734.2-201ENST00000624325 1377 ntBASIC21■□□□□ 0.95
DDX41Q9UJV9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX41Q9UJV9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21■□□□□ 0.95
DDX41Q9UJV9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX41Q9UJV9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDX41Q9UJV9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
DDX41Q9UJV9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21■□□□□ 0.95
DDX41Q9UJV9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21■□□□□ 0.95
DDX41Q9UJV9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21■□□□□ 0.95
DDX41Q9UJV9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21■□□□□ 0.95
DDX41Q9UJV9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21■□□□□ 0.95
DDX41Q9UJV9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX41Q9UJV9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21■□□□□ 0.95
DDX41Q9UJV9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21■□□□□ 0.95
DDX41Q9UJV9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21■□□□□ 0.95
DDX41Q9UJV9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21■□□□□ 0.95
DDX41Q9UJV9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
DDX41Q9UJV9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DDX41Q9UJV9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
DDX41Q9UJV9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX41Q9UJV9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX41Q9UJV9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21■□□□□ 0.95
DDX41Q9UJV9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX41Q9UJV9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDX41Q9UJV9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21■□□□□ 0.95
DDX41Q9UJV9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX41Q9UJV9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX41Q9UJV9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 AC092119.3-201ENST00000612618 583 ntBASIC20.99■□□□□ 0.95
DDX41Q9UJV9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 AC068587.9-201ENST00000641814 219 ntBASIC20.99■□□□□ 0.95
DDX41Q9UJV9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX41Q9UJV9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 AC006333.2-201ENST00000607957 2099 ntBASIC20.98■□□□□ 0.95
DDX41Q9UJV9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 AC034236.2-201ENST00000606662 1610 ntBASIC20.98■□□□□ 0.95
DDX41Q9UJV9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 TSSC2-201ENST00000450217 709 ntBASIC20.98■□□□□ 0.95
DDX41Q9UJV9 BX276092.5-203ENST00000456199 560 ntBASIC20.98■□□□□ 0.95
DDX41Q9UJV9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 AL121894.2-201ENST00000602977 491 ntBASIC20.98■□□□□ 0.95
DDX41Q9UJV9 AL121672.3-201ENST00000608644 468 ntBASIC20.98■□□□□ 0.95
DDX41Q9UJV9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX41Q9UJV9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms