Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 KRT18P5-201ENST00000436075 1291 ntBASIC17.72■□□□□ 0.43
NDE1Q9NXR1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 AF201337.1-201ENST00000520239 748 ntBASIC17.72■□□□□ 0.43
NDE1Q9NXR1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 KRT8P41-201ENST00000533985 1514 ntBASIC17.72■□□□□ 0.43
NDE1Q9NXR1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDE1Q9NXR1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 AC092368.3-202ENST00000574180 1591 ntBASIC17.71■□□□□ 0.43
NDE1Q9NXR1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 AC120498.8-201ENST00000614275 531 ntBASIC17.71■□□□□ 0.43
NDE1Q9NXR1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDE1Q9NXR1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
NDE1Q9NXR1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.71■□□□□ 0.42
NDE1Q9NXR1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NDE1Q9NXR1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 DUSP5P2-201ENST00000426873 1033 ntBASIC17.7■□□□□ 0.42
NDE1Q9NXR1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 AC105036.2-201ENST00000569468 176 ntBASIC17.7■□□□□ 0.42
NDE1Q9NXR1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 AC011270.2-201ENST00000624293 2550 ntBASIC17.7■□□□□ 0.42
NDE1Q9NXR1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDE1Q9NXR1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDE1Q9NXR1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms