Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AP002414.3-201ENST00000589352 1468 ntBASIC26.08■■□□□ 1.77
SLC52A1Q9NWF4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLC52A1Q9NWF4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
SLC52A1Q9NWF4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC26.08■■□□□ 1.77
SLC52A1Q9NWF4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SLC52A1Q9NWF4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC26.08■■□□□ 1.77
SLC52A1Q9NWF4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.76
SLC52A1Q9NWF4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
SLC52A1Q9NWF4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 AL049812.1-201ENST00000432563 2267 ntBASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 AL139424.1-201ENST00000607572 797 ntBASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC26.07■■□□□ 1.76
SLC52A1Q9NWF4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 PMS2P2-201ENST00000425039 1128 ntBASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 HS6ST1P1-201ENST00000481504 1234 ntBASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 AC073592.4-201ENST00000623827 446 ntBASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 AC007952.6-201ENST00000573168 2673 ntBASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 AC003957.1-201ENST00000625108 2673 ntBASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC26.06■■□□□ 1.76
SLC52A1Q9NWF4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 HMGN1P19-201ENST00000436976 333 ntBASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 AC009947.1-201ENST00000444350 727 ntBASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 RNA5SP416-201ENST00000516838 111 ntBASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 MIR3687-2-201ENST00000577708 61 ntBASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 MIR3687-1-201ENST00000614492 61 ntBASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC52A1Q9NWF4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 AC079776.2-201ENST00000641154 1609 ntBASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 KRT18P27-201ENST00000427733 1299 ntBASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 AC004967.1-201ENST00000453589 447 ntBASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SLC52A1Q9NWF4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms