Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.18■□□□□ 0.98
RBM28Q9NW13 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RBM28Q9NW13 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBM28Q9NW13 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBM28Q9NW13 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBM28Q9NW13 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.18■□□□□ 0.98
RBM28Q9NW13 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.18■□□□□ 0.98
RBM28Q9NW13 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.18■□□□□ 0.98
RBM28Q9NW13 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.18■□□□□ 0.98
RBM28Q9NW13 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.18■□□□□ 0.98
RBM28Q9NW13 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RBM28Q9NW13 AL121956.5-201ENST00000625261 221 ntBASIC21.18■□□□□ 0.98
RBM28Q9NW13 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RBM28Q9NW13 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBM28Q9NW13 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBM28Q9NW13 AC093010.1-201ENST00000473625 1624 ntBASIC21.18■□□□□ 0.98
RBM28Q9NW13 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBM28Q9NW13 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RBM28Q9NW13 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.18■□□□□ 0.98
RBM28Q9NW13 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 AL136038.3-201ENST00000561909 1096 ntBASIC21.17■□□□□ 0.98
RBM28Q9NW13 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 AC010331.1-201ENST00000611423 582 ntBASIC21.17■□□□□ 0.98
RBM28Q9NW13 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 ABALON-201ENST00000629058 1903 ntBASIC21.17■□□□□ 0.98
RBM28Q9NW13 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM28Q9NW13 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RBM28Q9NW13 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 AL096828.2-201ENST00000567259 1965 ntBASIC21.16■□□□□ 0.98
RBM28Q9NW13 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 AL354751.1-201ENST00000412768 1863 ntBASIC21.16■□□□□ 0.98
RBM28Q9NW13 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 MIR1224-201ENST00000408193 85 ntBASIC21.16■□□□□ 0.98
RBM28Q9NW13 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 AC087388.1-201ENST00000571370 1112 ntBASIC21.16■□□□□ 0.98
RBM28Q9NW13 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RBM28Q9NW13 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RBM28Q9NW13 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.15■□□□□ 0.98
RBM28Q9NW13 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.15■□□□□ 0.98
RBM28Q9NW13 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.15■□□□□ 0.98
RBM28Q9NW13 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.15■□□□□ 0.98
RBM28Q9NW13 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.15■□□□□ 0.98
RBM28Q9NW13 AP003733.1-201ENST00000491725 852 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms