Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 MTCL1P1-201ENST00000446207 792 ntBASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 AC009154.2-201ENST00000621177 724 ntBASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 HLA-A-201ENST00000376802 1334 ntBASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO28Q9NVF7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 TP73-AS1-210ENST00000637775 1455 ntBASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 AC132008.2-207ENST00000454517 770 ntBASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.96■□□□□ 0.95
FBXO28Q9NVF7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 AL022342.1-201ENST00000400363 863 ntBASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 AC126763.1-201ENST00000552015 2118 ntBASIC20.95■□□□□ 0.94
FBXO28Q9NVF7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 RNA5SP419-201ENST00000515908 135 ntBASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 AC120498.9-201ENST00000339021 3867 ntBASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO28Q9NVF7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FBXO28Q9NVF7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
FBXO28Q9NVF7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FBXO28Q9NVF7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FBXO28Q9NVF7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FBXO28Q9NVF7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.93■□□□□ 0.94
FBXO28Q9NVF7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.93■□□□□ 0.94
FBXO28Q9NVF7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.93■□□□□ 0.94
FBXO28Q9NVF7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms