Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
PDLIM7Q9NR12 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.39■□□□□ 0.86
PDLIM7Q9NR12 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PDLIM7Q9NR12 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDLIM7Q9NR12 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDLIM7Q9NR12 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 ZNF259P1-201ENST00000407656 1365 ntBASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 MIR149-201ENST00000384879 89 ntBASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 AL691403.2-201ENST00000618460 490 ntBASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PDLIM7Q9NR12 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 FAM215A-202ENST00000632077 792 ntBASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM7Q9NR12 TNXA-203ENST00000507684 2038 ntBASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 AC096582.2-201ENST00000510860 516 ntBASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 AC114341.1-201ENST00000618070 349 ntBASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM7Q9NR12 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms