Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 IRX1P1-201ENST00000438849 1838 ntBASIC21.25■□□□□ 0.99
EFCC1Q9HA90 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.25■□□□□ 0.99
EFCC1Q9HA90 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 AC116407.3-201ENST00000623905 1129 ntBASIC21.24■□□□□ 0.99
EFCC1Q9HA90 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 LTB4R2-202ENST00000528054 3092 ntBASIC21.24■□□□□ 0.99
EFCC1Q9HA90 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.24■□□□□ 0.99
EFCC1Q9HA90 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.23■□□□□ 0.99
EFCC1Q9HA90 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.23■□□□□ 0.99
EFCC1Q9HA90 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 MIR3180-4-201ENST00000582223 153 ntBASIC21.23■□□□□ 0.99
EFCC1Q9HA90 BNIP3P18-201ENST00000593976 575 ntBASIC21.23■□□□□ 0.99
EFCC1Q9HA90 AC024563.2-201ENST00000603282 481 ntBASIC21.23■□□□□ 0.99
EFCC1Q9HA90 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EFCC1Q9HA90 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 AC132008.2-207ENST00000454517 770 ntBASIC21.22■□□□□ 0.99
EFCC1Q9HA90 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 AC027601.4-201ENST00000611259 610 ntBASIC21.22■□□□□ 0.99
EFCC1Q9HA90 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCC1Q9HA90 AL353692.3-201ENST00000407031 1396 ntBASIC21.22■□□□□ 0.99
EFCC1Q9HA90 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.21■□□□□ 0.99
EFCC1Q9HA90 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 RPS2P28-201ENST00000314255 741 ntBASIC21.21■□□□□ 0.99
EFCC1Q9HA90 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 RPS8P6-201ENST00000426177 609 ntBASIC21.21■□□□□ 0.99
EFCC1Q9HA90 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 AC010327.4-202ENST00000591484 748 ntBASIC21.21■□□□□ 0.99
EFCC1Q9HA90 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.21■□□□□ 0.99
EFCC1Q9HA90 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms