Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 AC009879.1-201ENST00000520029 839 ntBASIC20.34■□□□□ 0.85
RNF39Q9H2S5 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 KRT8P32-201ENST00000512863 1461 ntBASIC20.34■□□□□ 0.85
RNF39Q9H2S5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RNF39Q9H2S5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 HBZP1-201ENST00000354915 429 ntBASIC20.33■□□□□ 0.85
RNF39Q9H2S5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 MTND6P32-201ENST00000457611 483 ntBASIC20.33■□□□□ 0.85
RNF39Q9H2S5 LDHBP3-201ENST00000514909 822 ntBASIC20.33■□□□□ 0.85
RNF39Q9H2S5 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 VENTXP5-201ENST00000523979 775 ntBASIC20.33■□□□□ 0.85
RNF39Q9H2S5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 TDGF1-205ENST00000542931 1192 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 BNIP3P40-201ENST00000596017 556 ntBASIC20.33■□□□□ 0.85
RNF39Q9H2S5 AC135507.1-201ENST00000607214 561 ntBASIC20.33■□□□□ 0.85
RNF39Q9H2S5 TTR-204ENST00000610404 1040 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF39Q9H2S5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RNF39Q9H2S5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RNF39Q9H2S5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF39Q9H2S5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 MTND2P18-201ENST00000419962 1030 ntBASIC20.32■□□□□ 0.84
RNF39Q9H2S5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 AC011352.1-201ENST00000512300 793 ntBASIC20.32■□□□□ 0.84
RNF39Q9H2S5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 AC112497.1-201ENST00000624824 639 ntBASIC20.32■□□□□ 0.84
RNF39Q9H2S5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 LINC02001-202ENST00000638682 1504 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF39Q9H2S5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 QRSL1P3-201ENST00000552666 1316 ntBASIC20.31■□□□□ 0.84
RNF39Q9H2S5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF39Q9H2S5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms