Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 AC116562.4-202ENST00000641738 218 ntBASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 AC009102.3-201ENST00000623118 1491 ntBASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 AC134043.2-201ENST00000624206 2238 ntBASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 C2orf69P3-201ENST00000565542 1120 ntBASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 AP000997.3-201ENST00000623333 2250 ntBASIC21.81■■□□□ 1.08
UPF3BQ9BZI7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 AL445228.2-201ENST00000605589 952 ntBASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 AC010947.1-201ENST00000623454 693 ntBASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPF3BQ9BZI7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 TSPY14P-201ENST00000303979 915 ntBASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 MIR149-201ENST00000384879 89 ntBASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.79■■□□□ 1.08
UPF3BQ9BZI7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF3BQ9BZI7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.78■■□□□ 1.08
UPF3BQ9BZI7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.78■■□□□ 1.08
UPF3BQ9BZI7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF3BQ9BZI7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF3BQ9BZI7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF3BQ9BZI7 LINC01126-201ENST00000623515 1646 ntBASIC21.78■■□□□ 1.08
UPF3BQ9BZI7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
UPF3BQ9BZI7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms