Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 AC068472.1-201ENST00000474589 881 ntBASIC19.04■□□□□ 0.64
LRRC3Q9BY71 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC3Q9BY71 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 TNXA-203ENST00000507684 2038 ntBASIC19.03■□□□□ 0.64
LRRC3Q9BY71 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 SAPCD2P3-201ENST00000455031 850 ntBASIC19.03■□□□□ 0.64
LRRC3Q9BY71 MINOS1P3-201ENST00000457048 203 ntBASIC19.03■□□□□ 0.64
LRRC3Q9BY71 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 AC005336.2-201ENST00000593183 939 ntBASIC19.03■□□□□ 0.64
LRRC3Q9BY71 AC008687.5-201ENST00000593746 558 ntBASIC19.03■□□□□ 0.64
LRRC3Q9BY71 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC3Q9BY71 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 MIR5100-201ENST00000579544 119 ntBASIC19.02■□□□□ 0.64
LRRC3Q9BY71 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC3Q9BY71 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.02■□□□□ 0.63
LRRC3Q9BY71 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC3Q9BY71 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC3Q9BY71 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC3Q9BY71 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 LINC01126-201ENST00000623515 1646 ntBASIC19.01■□□□□ 0.63
LRRC3Q9BY71 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 TSPY12P-201ENST00000421279 868 ntBASIC19.01■□□□□ 0.63
LRRC3Q9BY71 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC3Q9BY71 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms