Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NPAS2Q99743 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NPAS2Q99743 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NPAS2Q99743 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS2Q99743 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NPAS2Q99743 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS2Q99743 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS2Q99743 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.91■□□□□ 0.46
NPAS2Q99743 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS2Q99743 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS2Q99743 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS2Q99743 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NPAS2Q99743 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS2Q99743 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.91■□□□□ 0.46
NPAS2Q99743 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.91■□□□□ 0.46
NPAS2Q99743 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
NPAS2Q99743 AC138028.4-201ENST00000564984 1845 ntBASIC17.91■□□□□ 0.46
NPAS2Q99743 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
NPAS2Q99743 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS2Q99743 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS2Q99743 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NPAS2Q99743 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS2Q99743 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NPAS2Q99743 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.9■□□□□ 0.46
NPAS2Q99743 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
NPAS2Q99743 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.9■□□□□ 0.46
NPAS2Q99743 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NPAS2Q99743 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.9■□□□□ 0.46
NPAS2Q99743 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS2Q99743 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS2Q99743 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS2Q99743 DGCR10-201ENST00000609839 495 ntBASIC17.9■□□□□ 0.46
NPAS2Q99743 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS2Q99743 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
NPAS2Q99743 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NPAS2Q99743 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS2Q99743 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NPAS2Q99743 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS2Q99743 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS2Q99743 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NPAS2Q99743 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NPAS2Q99743 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NPAS2Q99743 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NPAS2Q99743 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.89■□□□□ 0.45
NPAS2Q99743 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS2Q99743 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS2Q99743 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.89■□□□□ 0.45
NPAS2Q99743 REXO1L9P-201ENST00000604264 2108 ntBASIC17.89■□□□□ 0.45
NPAS2Q99743 KRT8P41-201ENST00000533985 1514 ntBASIC17.89■□□□□ 0.45
NPAS2Q99743 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS2Q99743 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS2Q99743 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.89■□□□□ 0.45
NPAS2Q99743 AC091390.4-202ENST00000476426 537 ntBASIC17.89■□□□□ 0.45
NPAS2Q99743 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NPAS2Q99743 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.89■□□□□ 0.45
NPAS2Q99743 AP005242.2-201ENST00000580065 1175 ntBASIC17.89■□□□□ 0.45
NPAS2Q99743 AP000692.2-201ENST00000608391 879 ntBASIC17.89■□□□□ 0.45
NPAS2Q99743 AC011298.2-201ENST00000617989 482 ntBASIC17.89■□□□□ 0.45
NPAS2Q99743 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NPAS2Q99743 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
NPAS2Q99743 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NPAS2Q99743 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS2Q99743 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NPAS2Q99743 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
NPAS2Q99743 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.89■□□□□ 0.45
NPAS2Q99743 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS2Q99743 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS2Q99743 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS2Q99743 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
NPAS2Q99743 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
NPAS2Q99743 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
NPAS2Q99743 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS2Q99743 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms