Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.41■□□□□ 0.06
CCL19Q99731 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.41■□□□□ 0.06
CCL19Q99731 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CCL19Q99731 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.41■□□□□ 0.06
CCL19Q99731 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.41■□□□□ 0.06
CCL19Q99731 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.41■□□□□ 0.06
CCL19Q99731 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.41■□□□□ 0.06
CCL19Q99731 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.41■□□□□ 0.06
CCL19Q99731 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CCL19Q99731 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCL19Q99731 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCL19Q99731 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.4■□□□□ 0.06
CCL19Q99731 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.4■□□□□ 0.06
CCL19Q99731 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCL19Q99731 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.4■□□□□ 0.06
CCL19Q99731 AC068472.1-201ENST00000474589 881 ntBASIC15.4■□□□□ 0.06
CCL19Q99731 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.4■□□□□ 0.06
CCL19Q99731 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.4■□□□□ 0.06
CCL19Q99731 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.4■□□□□ 0.06
CCL19Q99731 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.4■□□□□ 0.06
CCL19Q99731 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 AC009154.2-201ENST00000621177 724 ntBASIC15.4■□□□□ 0.06
CCL19Q99731 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.4■□□□□ 0.06
CCL19Q99731 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCL19Q99731 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.4■□□□□ 0.06
CCL19Q99731 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.4■□□□□ 0.06
CCL19Q99731 AC099343.3-201ENST00000605834 2503 ntBASIC15.4■□□□□ 0.06
CCL19Q99731 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL19Q99731 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.4■□□□□ 0.06
CCL19Q99731 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCL19Q99731 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.39■□□□□ 0.05
CCL19Q99731 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCL19Q99731 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.39■□□□□ 0.05
CCL19Q99731 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CCL19Q99731 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.39■□□□□ 0.05
CCL19Q99731 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL19Q99731 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.39■□□□□ 0.05
CCL19Q99731 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.39■□□□□ 0.05
CCL19Q99731 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.39■□□□□ 0.05
CCL19Q99731 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.39■□□□□ 0.05
CCL19Q99731 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.39■□□□□ 0.05
CCL19Q99731 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.39■□□□□ 0.05
CCL19Q99731 AP001269.4-201ENST00000609611 512 ntBASIC15.39■□□□□ 0.05
CCL19Q99731 AC083906.6-201ENST00000641366 219 ntBASIC15.39■□□□□ 0.05
CCL19Q99731 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCL19Q99731 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CCL19Q99731 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CCL19Q99731 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CCL19Q99731 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
CCL19Q99731 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL19Q99731 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL19Q99731 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.38■□□□□ 0.05
CCL19Q99731 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCL19Q99731 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL19Q99731 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL19Q99731 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCL19Q99731 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCL19Q99731 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCL19Q99731 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL19Q99731 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL19Q99731 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL19Q99731 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms