Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.65■□□□□ 0.9
FGD4Q96M96 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.65■□□□□ 0.9
FGD4Q96M96 AC132008.2-207ENST00000454517 770 ntBASIC20.65■□□□□ 0.9
FGD4Q96M96 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.65■□□□□ 0.9
FGD4Q96M96 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.65■□□□□ 0.9
FGD4Q96M96 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.65■□□□□ 0.9
FGD4Q96M96 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.65■□□□□ 0.9
FGD4Q96M96 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FGD4Q96M96 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FGD4Q96M96 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
FGD4Q96M96 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
FGD4Q96M96 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FGD4Q96M96 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.64■□□□□ 0.9
FGD4Q96M96 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FGD4Q96M96 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FGD4Q96M96 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FGD4Q96M96 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FGD4Q96M96 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.64■□□□□ 0.89
FGD4Q96M96 AL590627.1-203ENST00000421194 1026 ntBASIC20.64■□□□□ 0.89
FGD4Q96M96 FAM197Y8-203ENST00000450145 560 ntBASIC20.64■□□□□ 0.89
FGD4Q96M96 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.64■□□□□ 0.89
FGD4Q96M96 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FGD4Q96M96 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.64■□□□□ 0.89
FGD4Q96M96 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.64■□□□□ 0.89
FGD4Q96M96 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.64■□□□□ 0.89
FGD4Q96M96 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.64■□□□□ 0.89
FGD4Q96M96 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.64■□□□□ 0.89
FGD4Q96M96 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FGD4Q96M96 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.64■□□□□ 0.89
FGD4Q96M96 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
FGD4Q96M96 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.64■□□□□ 0.89
FGD4Q96M96 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FGD4Q96M96 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.64■□□□□ 0.89
FGD4Q96M96 AC116562.4-201ENST00000641316 2276 ntBASIC20.64■□□□□ 0.89
FGD4Q96M96 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.63■□□□□ 0.89
FGD4Q96M96 TP73-AS1-210ENST00000637775 1455 ntBASIC20.63■□□□□ 0.89
FGD4Q96M96 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FGD4Q96M96 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FGD4Q96M96 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FGD4Q96M96 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FGD4Q96M96 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
FGD4Q96M96 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
FGD4Q96M96 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.63■□□□□ 0.89
FGD4Q96M96 SLC25A1P1-201ENST00000528351 927 ntBASIC20.63■□□□□ 0.89
FGD4Q96M96 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.63■□□□□ 0.89
FGD4Q96M96 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.63■□□□□ 0.89
FGD4Q96M96 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.63■□□□□ 0.89
FGD4Q96M96 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
FGD4Q96M96 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FGD4Q96M96 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FGD4Q96M96 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FGD4Q96M96 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FGD4Q96M96 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.63■□□□□ 0.89
FGD4Q96M96 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FGD4Q96M96 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.62■□□□□ 0.89
FGD4Q96M96 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 AC112777.1-201ENST00000540175 1423 ntBASIC20.62■□□□□ 0.89
FGD4Q96M96 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.62■□□□□ 0.89
FGD4Q96M96 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.62■□□□□ 0.89
FGD4Q96M96 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.62■□□□□ 0.89
FGD4Q96M96 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.62■□□□□ 0.89
FGD4Q96M96 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
FGD4Q96M96 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 KRT18P67-201ENST00000432816 1264 ntBASIC20.62■□□□□ 0.89
FGD4Q96M96 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.62■□□□□ 0.89
FGD4Q96M96 AC018712.1-201ENST00000455767 687 ntBASIC20.62■□□□□ 0.89
FGD4Q96M96 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
FGD4Q96M96 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.62■□□□□ 0.89
FGD4Q96M96 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.62■□□□□ 0.89
FGD4Q96M96 AP001005.1-201ENST00000571755 1248 ntBASIC20.62■□□□□ 0.89
FGD4Q96M96 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
FGD4Q96M96 AL138831.2-201ENST00000606564 490 ntBASIC20.62■□□□□ 0.89
FGD4Q96M96 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 AL773604.1-201ENST00000617417 272 ntBASIC20.62■□□□□ 0.89
FGD4Q96M96 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
FGD4Q96M96 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.62■□□□□ 0.89
FGD4Q96M96 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.62■□□□□ 0.89
FGD4Q96M96 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
FGD4Q96M96 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.62■□□□□ 0.89
FGD4Q96M96 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
FGD4Q96M96 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FGD4Q96M96 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.62■□□□□ 0.89
FGD4Q96M96 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms