Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
CALR3Q96L12 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CALR3Q96L12 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CALR3Q96L12 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CALR3Q96L12 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CALR3Q96L12 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.34■□□□□ 0.69
CALR3Q96L12 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
CALR3Q96L12 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CALR3Q96L12 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CALR3Q96L12 SLC25A1P2-201ENST00000430693 912 ntBASIC19.34■□□□□ 0.69
CALR3Q96L12 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CALR3Q96L12 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CALR3Q96L12 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.34■□□□□ 0.69
CALR3Q96L12 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.34■□□□□ 0.69
CALR3Q96L12 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CALR3Q96L12 WWOX-216ENST00000569818 525 ntBASIC19.34■□□□□ 0.69
CALR3Q96L12 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.34■□□□□ 0.69
CALR3Q96L12 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.34■□□□□ 0.69
CALR3Q96L12 ITM2C-210ENST00000620962 501 ntBASIC19.34■□□□□ 0.69
CALR3Q96L12 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.34■□□□□ 0.69
CALR3Q96L12 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CALR3Q96L12 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CALR3Q96L12 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CALR3Q96L12 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.34■□□□□ 0.69
CALR3Q96L12 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CALR3Q96L12 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CALR3Q96L12 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CALR3Q96L12 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CALR3Q96L12 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CALR3Q96L12 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CALR3Q96L12 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CALR3Q96L12 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CALR3Q96L12 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CALR3Q96L12 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CALR3Q96L12 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.33■□□□□ 0.69
CALR3Q96L12 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CALR3Q96L12 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CALR3Q96L12 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CALR3Q96L12 AC012618.2-201ENST00000428058 849 ntBASIC19.33■□□□□ 0.68
CALR3Q96L12 TSPY17P-201ENST00000450329 467 ntBASIC19.33■□□□□ 0.68
CALR3Q96L12 FAM201B-201ENST00000458407 597 ntBASIC19.33■□□□□ 0.68
CALR3Q96L12 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.33■□□□□ 0.68
CALR3Q96L12 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.33■□□□□ 0.68
CALR3Q96L12 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CALR3Q96L12 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CALR3Q96L12 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CALR3Q96L12 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CALR3Q96L12 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.33■□□□□ 0.68
CALR3Q96L12 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CALR3Q96L12 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CALR3Q96L12 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CALR3Q96L12 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CALR3Q96L12 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 ABHD17AP1-201ENST00000358206 933 ntBASIC19.32■□□□□ 0.68
CALR3Q96L12 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.32■□□□□ 0.68
CALR3Q96L12 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.32■□□□□ 0.68
CALR3Q96L12 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.32■□□□□ 0.68
CALR3Q96L12 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CALR3Q96L12 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.32■□□□□ 0.68
CALR3Q96L12 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.32■□□□□ 0.68
CALR3Q96L12 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CALR3Q96L12 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALR3Q96L12 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CALR3Q96L12 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.31■□□□□ 0.68
CALR3Q96L12 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
CALR3Q96L12 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CALR3Q96L12 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.31■□□□□ 0.68
CALR3Q96L12 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.31■□□□□ 0.68
CALR3Q96L12 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 RPS2P55-201ENST00000397318 883 ntBASIC19.31■□□□□ 0.68
CALR3Q96L12 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 UBE2SP1-201ENST00000450587 669 ntBASIC19.31■□□□□ 0.68
CALR3Q96L12 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.31■□□□□ 0.68
CALR3Q96L12 AC107956.1-201ENST00000494359 873 ntBASIC19.31■□□□□ 0.68
CALR3Q96L12 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.31■□□□□ 0.68
CALR3Q96L12 MIR4651-201ENST00000582622 73 ntBASIC19.31■□□□□ 0.68
CALR3Q96L12 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.31■□□□□ 0.68
CALR3Q96L12 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.31■□□□□ 0.68
CALR3Q96L12 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALR3Q96L12 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms