Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IFT43Q96FT9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.84■□□□□ 0.61
IFT43Q96FT9 AC112777.1-201ENST00000540175 1423 ntBASIC18.83■□□□□ 0.61
IFT43Q96FT9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IFT43Q96FT9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.83■□□□□ 0.61
IFT43Q96FT9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
IFT43Q96FT9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
IFT43Q96FT9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IFT43Q96FT9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IFT43Q96FT9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IFT43Q96FT9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
IFT43Q96FT9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFT43Q96FT9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IFT43Q96FT9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFT43Q96FT9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.83■□□□□ 0.6
IFT43Q96FT9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFT43Q96FT9 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.83■□□□□ 0.6
IFT43Q96FT9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
IFT43Q96FT9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IFT43Q96FT9 CR769767.2-201ENST00000622735 460 ntBASIC18.83■□□□□ 0.6
IFT43Q96FT9 AC011558.1-201ENST00000623459 338 ntBASIC18.83■□□□□ 0.6
IFT43Q96FT9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFT43Q96FT9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.83■□□□□ 0.6
IFT43Q96FT9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFT43Q96FT9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.83■□□□□ 0.6
IFT43Q96FT9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFT43Q96FT9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.83■□□□□ 0.6
IFT43Q96FT9 AC139713.2-201ENST00000641328 2723 ntBASIC18.83■□□□□ 0.6
IFT43Q96FT9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IFT43Q96FT9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
IFT43Q96FT9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.82■□□□□ 0.6
IFT43Q96FT9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
IFT43Q96FT9 AC034236.2-201ENST00000606662 1610 ntBASIC18.82■□□□□ 0.6
IFT43Q96FT9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.82■□□□□ 0.6
IFT43Q96FT9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
IFT43Q96FT9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 AL031133.1-201ENST00000406807 723 ntBASIC18.82■□□□□ 0.6
IFT43Q96FT9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.82■□□□□ 0.6
IFT43Q96FT9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.82■□□□□ 0.6
IFT43Q96FT9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 AC140113.3-201ENST00000605663 199 ntBASIC18.82■□□□□ 0.6
IFT43Q96FT9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
IFT43Q96FT9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.82■□□□□ 0.6
IFT43Q96FT9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.82■□□□□ 0.6
IFT43Q96FT9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 AL499627.1-201ENST00000569373 2188 ntBASIC18.82■□□□□ 0.6
IFT43Q96FT9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
IFT43Q96FT9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.82■□□□□ 0.6
IFT43Q96FT9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IFT43Q96FT9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 NEK4P2-201ENST00000580004 1012 ntBASIC18.81■□□□□ 0.6
IFT43Q96FT9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IFT43Q96FT9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
IFT43Q96FT9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms