Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 AC034236.2-201ENST00000606662 1610 ntBASIC14.45□□□□□ -0.1
NPIPB3Q92617 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 MESTP1-201ENST00000404287 994 ntBASIC14.45□□□□□ -0.1
NPIPB3Q92617 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.45□□□□□ -0.1
NPIPB3Q92617 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 SLC25A1P4-201ENST00000567977 778 ntBASIC14.45□□□□□ -0.1
NPIPB3Q92617 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 MIR4651-201ENST00000582622 73 ntBASIC14.45□□□□□ -0.1
NPIPB3Q92617 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 GPAT2P1-201ENST00000444924 1672 ntBASIC14.45□□□□□ -0.1
NPIPB3Q92617 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB3Q92617 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB3Q92617 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 AC099343.3-201ENST00000605834 2503 ntBASIC14.44□□□□□ -0.1
NPIPB3Q92617 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 FLJ13224-201ENST00000313737 1514 ntBASIC14.44□□□□□ -0.1
NPIPB3Q92617 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB3Q92617 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPB3Q92617 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 AL096828.2-201ENST00000567259 1965 ntBASIC14.43□□□□□ -0.1
NPIPB3Q92617 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms