Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 AL121832.2-201ENST00000610979 668 ntBASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 KRT8P41-201ENST00000533985 1514 ntBASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L1Q8WWY6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 AC092437.1-201ENST00000624794 1048 ntBASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L1Q8WWY6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 AC011270.2-201ENST00000624293 2550 ntBASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 PKD1P1-201ENST00000458669 6805 ntBASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 AL391005.1-201ENST00000623953 2435 ntBASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 CROCCP2-202ENST00000412962 2773 ntBASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 AC105020.1-201ENST00000435356 2205 ntBASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
MBD3L1Q8WWY6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms