Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.73■□□□□ 0.59
RTL3Q8N8U3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.73■□□□□ 0.59
RTL3Q8N8U3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTL3Q8N8U3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RTL3Q8N8U3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.72■□□□□ 0.59
RTL3Q8N8U3 KRT18P48-201ENST00000434763 852 ntBASIC18.72■□□□□ 0.59
RTL3Q8N8U3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 AL136038.3-201ENST00000561909 1096 ntBASIC18.72■□□□□ 0.59
RTL3Q8N8U3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 AL445228.2-201ENST00000605589 952 ntBASIC18.72■□□□□ 0.59
RTL3Q8N8U3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.72■□□□□ 0.59
RTL3Q8N8U3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 AC113404.2-201ENST00000507884 177 ntBASIC18.71■□□□□ 0.59
RTL3Q8N8U3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 AC135050.7-201ENST00000624508 2218 ntBASIC18.71■□□□□ 0.59
RTL3Q8N8U3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.71■□□□□ 0.59
RTL3Q8N8U3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RTL3Q8N8U3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RTL3Q8N8U3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.7■□□□□ 0.58
RTL3Q8N8U3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL3Q8N8U3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTL3Q8N8U3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms