Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 UNC93B2-201ENST00000285383 730 ntBASIC17.89■□□□□ 0.45
CPSF7Q8N684 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 AP000525.1-201ENST00000608286 694 ntBASIC17.89■□□□□ 0.45
CPSF7Q8N684 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CPSF7Q8N684 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPSF7Q8N684 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.88■□□□□ 0.45
CPSF7Q8N684 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.88■□□□□ 0.45
CPSF7Q8N684 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.88■□□□□ 0.45
CPSF7Q8N684 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 PRSS44-201ENST00000515154 1146 ntBASIC17.88■□□□□ 0.45
CPSF7Q8N684 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
CPSF7Q8N684 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.88■□□□□ 0.45
CPSF7Q8N684 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 AC012306.2-201ENST00000609350 630 ntBASIC17.88■□□□□ 0.45
CPSF7Q8N684 AC097493.4-201ENST00000641197 219 ntBASIC17.88■□□□□ 0.45
CPSF7Q8N684 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF7Q8N684 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 AC009053.2-201ENST00000563701 2365 ntBASIC17.87■□□□□ 0.45
CPSF7Q8N684 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.87■□□□□ 0.45
CPSF7Q8N684 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF7Q8N684 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.87■□□□□ 0.45
CPSF7Q8N684 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms