Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LDB1Q86U70 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
LDB1Q86U70 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 AL096828.2-201ENST00000567259 1965 ntBASIC18.26■□□□□ 0.51
LDB1Q86U70 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.26■□□□□ 0.51
LDB1Q86U70 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.26■□□□□ 0.51
LDB1Q86U70 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.26■□□□□ 0.51
LDB1Q86U70 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LDB1Q86U70 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LDB1Q86U70 AL138966.2-201ENST00000621997 464 ntBASIC18.26■□□□□ 0.51
LDB1Q86U70 AC141257.4-201ENST00000634557 245 ntBASIC18.26■□□□□ 0.51
LDB1Q86U70 AC136944.6-201ENST00000634818 245 ntBASIC18.26■□□□□ 0.51
LDB1Q86U70 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.26■□□□□ 0.51
LDB1Q86U70 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.26■□□□□ 0.51
LDB1Q86U70 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LDB1Q86U70 FZD10-202ENST00000539839 3282 ntBASIC18.26■□□□□ 0.51
LDB1Q86U70 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LDB1Q86U70 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LDB1Q86U70 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LDB1Q86U70 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LDB1Q86U70 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LDB1Q86U70 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LDB1Q86U70 AC068880.1-201ENST00000507289 2297 ntBASIC18.25■□□□□ 0.51
LDB1Q86U70 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LDB1Q86U70 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LDB1Q86U70 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.25■□□□□ 0.51
LDB1Q86U70 AC067852.2-201ENST00000590513 2313 ntBASIC18.25■□□□□ 0.51
LDB1Q86U70 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.25■□□□□ 0.51
LDB1Q86U70 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LDB1Q86U70 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.25■□□□□ 0.51
LDB1Q86U70 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LDB1Q86U70 AC012306.2-201ENST00000609350 630 ntBASIC18.25■□□□□ 0.51
LDB1Q86U70 AL023973.1-201ENST00000624619 620 ntBASIC18.25■□□□□ 0.51
LDB1Q86U70 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.25■□□□□ 0.51
LDB1Q86U70 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.25■□□□□ 0.51
LDB1Q86U70 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LDB1Q86U70 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LDB1Q86U70 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LDB1Q86U70 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.25■□□□□ 0.51
LDB1Q86U70 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.25■□□□□ 0.51
LDB1Q86U70 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.25■□□□□ 0.51
LDB1Q86U70 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LDB1Q86U70 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LDB1Q86U70 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LDB1Q86U70 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LDB1Q86U70 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LDB1Q86U70 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LDB1Q86U70 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LDB1Q86U70 HTR7P1-202ENST00000624664 4411 ntBASIC18.24■□□□□ 0.51
LDB1Q86U70 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.24■□□□□ 0.51
LDB1Q86U70 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.24■□□□□ 0.51
LDB1Q86U70 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LDB1Q86U70 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LDB1Q86U70 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.24■□□□□ 0.51
LDB1Q86U70 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.24■□□□□ 0.51
LDB1Q86U70 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.24■□□□□ 0.51
LDB1Q86U70 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.24■□□□□ 0.51
LDB1Q86U70 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.24■□□□□ 0.51
LDB1Q86U70 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LDB1Q86U70 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LDB1Q86U70 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.23■□□□□ 0.51
LDB1Q86U70 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LDB1Q86U70 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LDB1Q86U70 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LDB1Q86U70 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LDB1Q86U70 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LDB1Q86U70 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.23■□□□□ 0.51
LDB1Q86U70 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LDB1Q86U70 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.23■□□□□ 0.51
LDB1Q86U70 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LDB1Q86U70 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LDB1Q86U70 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.23■□□□□ 0.51
LDB1Q86U70 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LDB1Q86U70 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LDB1Q86U70 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LDB1Q86U70 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LDB1Q86U70 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms