Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASC4Q6P4E1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.68■□□□□ 0.58
CASC4Q6P4E1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CASC4Q6P4E1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASC4Q6P4E1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASC4Q6P4E1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASC4Q6P4E1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CASC4Q6P4E1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CASC4Q6P4E1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.68■□□□□ 0.58
CASC4Q6P4E1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.68■□□□□ 0.58
CASC4Q6P4E1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CASC4Q6P4E1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 AC067852.2-201ENST00000590513 2313 ntBASIC18.67■□□□□ 0.58
CASC4Q6P4E1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 AC036111.1-201ENST00000533973 1582 ntBASIC18.67■□□□□ 0.58
CASC4Q6P4E1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CASC4Q6P4E1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 KRT8P50-201ENST00000562022 1438 ntBASIC18.66■□□□□ 0.58
CASC4Q6P4E1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.66■□□□□ 0.58
CASC4Q6P4E1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASC4Q6P4E1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CASC4Q6P4E1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CASC4Q6P4E1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CASC4Q6P4E1 GMCL1P1-201ENST00000463439 1581 ntBASIC18.64■□□□□ 0.58
CASC4Q6P4E1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms