Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 AC116562.2-201ENST00000507042 360 ntBASIC16.81■□□□□ 0.28
ZNF544Q6NX49 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 REXO1L10P-201ENST00000615707 1290 ntBASIC16.81■□□□□ 0.28
ZNF544Q6NX49 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
ZNF544Q6NX49 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 RBM17P1-201ENST00000453646 1190 ntBASIC16.8■□□□□ 0.28
ZNF544Q6NX49 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 AC097493.4-201ENST00000641197 219 ntBASIC16.8■□□□□ 0.28
ZNF544Q6NX49 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ZNF544Q6NX49 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.79■□□□□ 0.28
ZNF544Q6NX49 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms