Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BSXQ3C1V8 AC026271.3-201ENST00000571884 352 ntBASIC14.79□□□□□ -0.04
BSXQ3C1V8 RN7SL471P-201ENST00000580476 299 ntBASIC14.79□□□□□ -0.04
BSXQ3C1V8 AC092666.2-201ENST00000613287 246 ntBASIC14.79□□□□□ -0.04
BSXQ3C1V8 FER1L4-210ENST00000615531 5998 ntBASIC14.79□□□□□ -0.04
BSXQ3C1V8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BSXQ3C1V8 CROCCP1-201ENST00000426910 5675 ntBASIC14.79□□□□□ -0.04
BSXQ3C1V8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BSXQ3C1V8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
BSXQ3C1V8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BSXQ3C1V8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BSXQ3C1V8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BSXQ3C1V8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BSXQ3C1V8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BSXQ3C1V8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
BSXQ3C1V8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 AC004951.3-201ENST00000418645 1148 ntBASIC14.78□□□□□ -0.04
BSXQ3C1V8 CKBP1-201ENST00000565489 1086 ntBASIC14.78□□□□□ -0.04
BSXQ3C1V8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.78□□□□□ -0.04
BSXQ3C1V8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
BSXQ3C1V8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 AC093677.2-201ENST00000600169 1863 ntBASIC14.78□□□□□ -0.04
BSXQ3C1V8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BSXQ3C1V8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BSXQ3C1V8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BSXQ3C1V8 AC135776.1-201ENST00000319817 2481 ntBASIC14.77□□□□□ -0.04
BSXQ3C1V8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
BSXQ3C1V8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BSXQ3C1V8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.77□□□□□ -0.04
BSXQ3C1V8 AC134043.2-201ENST00000624206 2238 ntBASIC14.77□□□□□ -0.04
BSXQ3C1V8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.77□□□□□ -0.04
BSXQ3C1V8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
BSXQ3C1V8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BSXQ3C1V8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
BSXQ3C1V8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.77□□□□□ -0.04
BSXQ3C1V8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BSXQ3C1V8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
BSXQ3C1V8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BSXQ3C1V8 HTR7P1-201ENST00000538670 1336 ntBASIC14.77□□□□□ -0.04
BSXQ3C1V8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
BSXQ3C1V8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BSXQ3C1V8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.77□□□□□ -0.05
BSXQ3C1V8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.77□□□□□ -0.05
BSXQ3C1V8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.77□□□□□ -0.05
BSXQ3C1V8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
BSXQ3C1V8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.77□□□□□ -0.05
BSXQ3C1V8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BSXQ3C1V8 RCC2P3-201ENST00000418112 1537 ntBASIC14.76□□□□□ -0.05
BSXQ3C1V8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BSXQ3C1V8 AC008556.1-201ENST00000610908 2040 ntBASIC14.76□□□□□ -0.05
BSXQ3C1V8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BSXQ3C1V8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
BSXQ3C1V8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
BSXQ3C1V8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
BSXQ3C1V8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BSXQ3C1V8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BSXQ3C1V8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BSXQ3C1V8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms