Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.94■□□□□ 0.46
CDK3Q00526 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK3Q00526 LINC00602-201ENST00000629776 2065 ntBASIC17.94■□□□□ 0.46
CDK3Q00526 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK3Q00526 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK3Q00526 TSPY12P-201ENST00000421279 868 ntBASIC17.94■□□□□ 0.46
CDK3Q00526 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK3Q00526 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.94■□□□□ 0.46
CDK3Q00526 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.94■□□□□ 0.46
CDK3Q00526 AP000867.3-201ENST00000524675 377 ntBASIC17.94■□□□□ 0.46
CDK3Q00526 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.94■□□□□ 0.46
CDK3Q00526 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.94■□□□□ 0.46
CDK3Q00526 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK3Q00526 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 AC012313.10-201ENST00000623509 926 ntBASIC17.94■□□□□ 0.46
CDK3Q00526 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.94■□□□□ 0.46
CDK3Q00526 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK3Q00526 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.94■□□□□ 0.46
CDK3Q00526 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CDK3Q00526 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK3Q00526 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.93■□□□□ 0.46
CDK3Q00526 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CDK3Q00526 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDK3Q00526 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.93■□□□□ 0.46
CDK3Q00526 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.93■□□□□ 0.46
CDK3Q00526 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
CDK3Q00526 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.93■□□□□ 0.46
CDK3Q00526 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.93■□□□□ 0.46
CDK3Q00526 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.93■□□□□ 0.46
CDK3Q00526 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.93■□□□□ 0.46
CDK3Q00526 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.93■□□□□ 0.46
CDK3Q00526 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CDK3Q00526 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK3Q00526 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 AC233702.3-201ENST00000578656 1387 ntBASIC17.92■□□□□ 0.46
CDK3Q00526 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDK3Q00526 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CDK3Q00526 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 LINC00167-201ENST00000530583 1419 ntBASIC17.92■□□□□ 0.46
CDK3Q00526 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDK3Q00526 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.92■□□□□ 0.46
CDK3Q00526 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.92■□□□□ 0.46
CDK3Q00526 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.92■□□□□ 0.46
CDK3Q00526 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.92■□□□□ 0.46
CDK3Q00526 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.92■□□□□ 0.46
CDK3Q00526 KRT126P-201ENST00000549467 1181 ntBASIC17.92■□□□□ 0.46
CDK3Q00526 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 PRELID1P1-202ENST00000567272 903 ntBASIC17.92■□□□□ 0.46
CDK3Q00526 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.92■□□□□ 0.46
CDK3Q00526 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.92■□□□□ 0.46
CDK3Q00526 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.92■□□□□ 0.46
CDK3Q00526 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.92■□□□□ 0.46
CDK3Q00526 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 AL138781.2-201ENST00000617896 1843 ntBASIC17.92■□□□□ 0.46
CDK3Q00526 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDK3Q00526 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDK3Q00526 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.92■□□□□ 0.46
CDK3Q00526 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.92■□□□□ 0.46
CDK3Q00526 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.92■□□□□ 0.46
CDK3Q00526 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDK3Q00526 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDK3Q00526 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.92■□□□□ 0.46
CDK3Q00526 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.91■□□□□ 0.46
CDK3Q00526 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms