Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YBX1P67809 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.84■□□□□ 0.45
YBX1P67809 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.84■□□□□ 0.45
YBX1P67809 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YBX1P67809 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
YBX1P67809 TSPY5P-201ENST00000426936 936 ntBASIC17.84■□□□□ 0.45
YBX1P67809 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.84■□□□□ 0.45
YBX1P67809 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.84■□□□□ 0.45
YBX1P67809 KRT18P41-201ENST00000518924 1277 ntBASIC17.84■□□□□ 0.45
YBX1P67809 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.84■□□□□ 0.45
YBX1P67809 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.84■□□□□ 0.45
YBX1P67809 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
YBX1P67809 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YBX1P67809 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
YBX1P67809 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
YBX1P67809 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
YBX1P67809 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
YBX1P67809 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.84■□□□□ 0.45
YBX1P67809 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
YBX1P67809 ESPNP-201ENST00000270691 2015 ntBASIC17.84■□□□□ 0.45
YBX1P67809 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
YBX1P67809 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.84■□□□□ 0.45
YBX1P67809 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
YBX1P67809 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
YBX1P67809 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.83■□□□□ 0.45
YBX1P67809 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
YBX1P67809 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
YBX1P67809 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
YBX1P67809 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
YBX1P67809 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
YBX1P67809 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
YBX1P67809 SPDYE15P-201ENST00000424157 909 ntBASIC17.83■□□□□ 0.44
YBX1P67809 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
YBX1P67809 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.83■□□□□ 0.44
YBX1P67809 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.83■□□□□ 0.44
YBX1P67809 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.83■□□□□ 0.44
YBX1P67809 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
YBX1P67809 AL157888.1-201ENST00000631930 593 ntBASIC17.83■□□□□ 0.44
YBX1P67809 AC012313.1-201ENST00000593393 3059 ntBASIC17.83■□□□□ 0.44
YBX1P67809 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
YBX1P67809 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
YBX1P67809 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.83■□□□□ 0.44
YBX1P67809 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
YBX1P67809 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
YBX1P67809 AC139713.2-201ENST00000641328 2723 ntBASIC17.83■□□□□ 0.44
YBX1P67809 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.83■□□□□ 0.44
YBX1P67809 MYLKP1-201ENST00000509077 1580 ntBASIC17.83■□□□□ 0.44
YBX1P67809 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.83■□□□□ 0.44
YBX1P67809 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.82■□□□□ 0.44
YBX1P67809 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.82■□□□□ 0.44
YBX1P67809 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
YBX1P67809 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
YBX1P67809 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
YBX1P67809 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
YBX1P67809 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.82■□□□□ 0.44
YBX1P67809 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 RNF152P1-201ENST00000397754 604 ntBASIC17.82■□□□□ 0.44
YBX1P67809 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.82■□□□□ 0.44
YBX1P67809 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
YBX1P67809 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.82■□□□□ 0.44
YBX1P67809 AC104390.1-201ENST00000555663 520 ntBASIC17.82■□□□□ 0.44
YBX1P67809 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.82■□□□□ 0.44
YBX1P67809 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
YBX1P67809 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
YBX1P67809 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
YBX1P67809 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.82■□□□□ 0.44
YBX1P67809 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.82■□□□□ 0.44
YBX1P67809 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.81■□□□□ 0.44
YBX1P67809 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.81■□□□□ 0.44
YBX1P67809 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
YBX1P67809 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.81■□□□□ 0.44
YBX1P67809 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.81■□□□□ 0.44
YBX1P67809 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
YBX1P67809 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 AC020763.4-201ENST00000623414 4170 ntBASIC17.81■□□□□ 0.44
YBX1P67809 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.81■□□□□ 0.44
YBX1P67809 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
YBX1P67809 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
YBX1P67809 AP000523.1-201ENST00000398242 1049 ntBASIC17.81■□□□□ 0.44
YBX1P67809 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.81■□□□□ 0.44
YBX1P67809 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms