Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.09■□□□□ 0.01
SUPT4H1P63272 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SUPT4H1P63272 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
SUPT4H1P63272 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.09■□□□□ 0.01
SUPT4H1P63272 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
SUPT4H1P63272 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SUPT4H1P63272 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SUPT4H1P63272 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SUPT4H1P63272 KRT8P50-201ENST00000562022 1438 ntBASIC15.09■□□□□ 0.01
SUPT4H1P63272 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SUPT4H1P63272 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SUPT4H1P63272 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SUPT4H1P63272 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.08■□□□□ 0
SUPT4H1P63272 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SUPT4H1P63272 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.08■□□□□ 0
SUPT4H1P63272 AC093010.1-201ENST00000473625 1624 ntBASIC15.08■□□□□ 0
SUPT4H1P63272 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 UNC93B4-201ENST00000505679 747 ntBASIC15.08■□□□□ 0
SUPT4H1P63272 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.08■□□□□ 0
SUPT4H1P63272 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.08■□□□□ 0
SUPT4H1P63272 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SUPT4H1P63272 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
SUPT4H1P63272 AC018695.7-201ENST00000624587 2492 ntBASIC15.08■□□□□ 0
SUPT4H1P63272 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.08■□□□□ 0
SUPT4H1P63272 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SUPT4H1P63272 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.07■□□□□ 0
SUPT4H1P63272 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.07■□□□□ 0
SUPT4H1P63272 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SUPT4H1P63272 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SUPT4H1P63272 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.07■□□□□ 0
SUPT4H1P63272 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.07■□□□□ 0
SUPT4H1P63272 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.07■□□□□ 0
SUPT4H1P63272 AL137784.2-201ENST00000607332 1000 ntBASIC15.07■□□□□ 0
SUPT4H1P63272 AL445675.2-201ENST00000620291 557 ntBASIC15.07■□□□□ 0
SUPT4H1P63272 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.07■□□□□ 0
SUPT4H1P63272 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.07■□□□□ 0
SUPT4H1P63272 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 SDHAP2-201ENST00000455183 2001 ntBASIC15.07■□□□□ 0
SUPT4H1P63272 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.07■□□□□ 0
SUPT4H1P63272 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SUPT4H1P63272 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SUPT4H1P63272 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.07■□□□□ 0
SUPT4H1P63272 CROCCP2-202ENST00000412962 2773 ntBASIC15.07■□□□□ 0
SUPT4H1P63272 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.07■□□□□ 0
SUPT4H1P63272 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.07■□□□□ 0
SUPT4H1P63272 AL138688.1-201ENST00000624851 1594 ntBASIC15.07■□□□□ 0
SUPT4H1P63272 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SUPT4H1P63272 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SUPT4H1P63272 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SUPT4H1P63272 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SUPT4H1P63272 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SUPT4H1P63272 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SUPT4H1P63272 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.06■□□□□ 0
SUPT4H1P63272 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SUPT4H1P63272 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.06■□□□□ 0
SUPT4H1P63272 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SUPT4H1P63272 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SUPT4H1P63272 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SUPT4H1P63272 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.06■□□□□ 0
SUPT4H1P63272 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SUPT4H1P63272 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SUPT4H1P63272 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SUPT4H1P63272 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SUPT4H1P63272 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.06■□□□□ 0
SUPT4H1P63272 MIR564-202ENST00000385049 94 ntBASIC15.06■□□□□ 0
SUPT4H1P63272 SLC29A4P1-201ENST00000398760 971 ntBASIC15.06■□□□□ 0
SUPT4H1P63272 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SUPT4H1P63272 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SUPT4H1P63272 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.06■□□□□ 0
SUPT4H1P63272 AC091390.4-202ENST00000476426 537 ntBASIC15.06■□□□□ 0
SUPT4H1P63272 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms