Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KCNQ4P56696 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNQ4P56696 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.23■■□□□ 1.31
KCNQ4P56696 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.23■■□□□ 1.31
KCNQ4P56696 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNQ4P56696 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNQ4P56696 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNQ4P56696 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.22■■□□□ 1.31
KCNQ4P56696 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
KCNQ4P56696 BEX3-201ENST00000361298 921 ntTSL 2 BASIC23.22■■□□□ 1.31
KCNQ4P56696 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC23.22■■□□□ 1.31
KCNQ4P56696 AP006288.1-201ENST00000446065 395 ntBASIC23.22■■□□□ 1.31
KCNQ4P56696 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
KCNQ4P56696 ALG1L5P-201ENST00000482043 771 ntBASIC23.22■■□□□ 1.31
KCNQ4P56696 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
KCNQ4P56696 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.22■■□□□ 1.31
KCNQ4P56696 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.22■■□□□ 1.31
KCNQ4P56696 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNQ4P56696 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNQ4P56696 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNQ4P56696 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
KCNQ4P56696 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNQ4P56696 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC23.22■■□□□ 1.31
KCNQ4P56696 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.22■■□□□ 1.31
KCNQ4P56696 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNQ4P56696 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.22■■□□□ 1.31
KCNQ4P56696 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KCNQ4P56696 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
KCNQ4P56696 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNQ4P56696 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
KCNQ4P56696 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNQ4P56696 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
KCNQ4P56696 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KCNQ4P56696 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNQ4P56696 CFL1-202ENST00000524553 860 ntTSL 2 BASIC23.21■■□□□ 1.31
KCNQ4P56696 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
KCNQ4P56696 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC23.21■■□□□ 1.31
KCNQ4P56696 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.21■■□□□ 1.31
KCNQ4P56696 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNQ4P56696 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC23.21■■□□□ 1.31
KCNQ4P56696 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KCNQ4P56696 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNQ4P56696 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNQ4P56696 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNQ4P56696 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.2■■□□□ 1.3
KCNQ4P56696 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNQ4P56696 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNQ4P56696 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNQ4P56696 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
KCNQ4P56696 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC23.2■■□□□ 1.3
KCNQ4P56696 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
KCNQ4P56696 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
KCNQ4P56696 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.2■■□□□ 1.3
KCNQ4P56696 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.2■■□□□ 1.3
KCNQ4P56696 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC23.2■■□□□ 1.3
KCNQ4P56696 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC23.2■■□□□ 1.3
KCNQ4P56696 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC23.2■■□□□ 1.3
KCNQ4P56696 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNQ4P56696 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
KCNQ4P56696 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNQ4P56696 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
KCNQ4P56696 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.2■■□□□ 1.3
KCNQ4P56696 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
KCNQ4P56696 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KCNQ4P56696 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNQ4P56696 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNQ4P56696 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.19■■□□□ 1.3
KCNQ4P56696 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNQ4P56696 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNQ4P56696 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNQ4P56696 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23.19■■□□□ 1.3
KCNQ4P56696 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNQ4P56696 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KCNQ4P56696 MIR4469-201ENST00000583919 79 ntBASIC23.19■■□□□ 1.3
KCNQ4P56696 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.19■■□□□ 1.3
KCNQ4P56696 AC092865.6-201ENST00000642101 219 ntBASIC23.19■■□□□ 1.3
KCNQ4P56696 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KCNQ4P56696 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNQ4P56696 AC007952.6-201ENST00000573168 2673 ntBASIC23.19■■□□□ 1.3
KCNQ4P56696 AC003957.1-201ENST00000625108 2673 ntBASIC23.19■■□□□ 1.3
KCNQ4P56696 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KCNQ4P56696 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNQ4P56696 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KCNQ4P56696 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
KCNQ4P56696 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ4P56696 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNQ4P56696 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ4P56696 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.18■■□□□ 1.3
KCNQ4P56696 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ4P56696 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ4P56696 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNQ4P56696 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
KCNQ4P56696 CALY-203ENST00000368558 825 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNQ4P56696 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
KCNQ4P56696 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC23.18■■□□□ 1.3
KCNQ4P56696 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNQ4P56696 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC23.18■■□□□ 1.3
KCNQ4P56696 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNQ4P56696 LINC01126-201ENST00000623515 1646 ntBASIC23.18■■□□□ 1.3
KCNQ4P56696 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms