Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
GFRA1P56159 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
GFRA1P56159 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA1P56159 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA1P56159 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.34■□□□□ 0.21
GFRA1P56159 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.34■□□□□ 0.21
GFRA1P56159 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA1P56159 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.34■□□□□ 0.21
GFRA1P56159 CLEC4GP1-201ENST00000596555 870 ntBASIC16.34■□□□□ 0.21
GFRA1P56159 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.34■□□□□ 0.21
GFRA1P56159 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA1P56159 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.34■□□□□ 0.21
GFRA1P56159 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.34■□□□□ 0.21
GFRA1P56159 LINC00602-201ENST00000629776 2065 ntBASIC16.34■□□□□ 0.21
GFRA1P56159 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA1P56159 LINC00167-201ENST00000530583 1419 ntBASIC16.34■□□□□ 0.21
GFRA1P56159 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
GFRA1P56159 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
GFRA1P56159 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.34■□□□□ 0.21
GFRA1P56159 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA1P56159 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA1P56159 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GFRA1P56159 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GFRA1P56159 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.33■□□□□ 0.21
GFRA1P56159 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.33■□□□□ 0.21
GFRA1P56159 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GFRA1P56159 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GFRA1P56159 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.33■□□□□ 0.21
GFRA1P56159 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.33■□□□□ 0.21
GFRA1P56159 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
GFRA1P56159 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
GFRA1P56159 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GFRA1P56159 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GFRA1P56159 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
GFRA1P56159 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 TSPY12P-201ENST00000421279 868 ntBASIC16.33■□□□□ 0.2
GFRA1P56159 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
GFRA1P56159 LINC00265-3P-201ENST00000447588 903 ntBASIC16.33■□□□□ 0.2
GFRA1P56159 TOB2P1-201ENST00000469761 992 ntBASIC16.33■□□□□ 0.2
GFRA1P56159 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA1P56159 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.33■□□□□ 0.2
GFRA1P56159 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.33■□□□□ 0.2
GFRA1P56159 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.33■□□□□ 0.2
GFRA1P56159 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA1P56159 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA1P56159 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
GFRA1P56159 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA1P56159 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA1P56159 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA1P56159 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.33■□□□□ 0.2
GFRA1P56159 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GFRA1P56159 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA1P56159 AC004408.2-201ENST00000623613 2777 ntBASIC16.32■□□□□ 0.2
GFRA1P56159 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.32■□□□□ 0.2
GFRA1P56159 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA1P56159 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
GFRA1P56159 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA1P56159 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.32■□□□□ 0.2
GFRA1P56159 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA1P56159 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.32■□□□□ 0.2
GFRA1P56159 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.32■□□□□ 0.2
GFRA1P56159 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
GFRA1P56159 AL845331.1-201ENST00000424978 1190 ntBASIC16.32■□□□□ 0.2
GFRA1P56159 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA1P56159 DUSP5P1-201ENST00000441325 1139 ntBASIC16.32■□□□□ 0.2
GFRA1P56159 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA1P56159 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.32■□□□□ 0.2
GFRA1P56159 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.32■□□□□ 0.2
GFRA1P56159 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.32■□□□□ 0.2
GFRA1P56159 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.32■□□□□ 0.2
GFRA1P56159 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.32■□□□□ 0.2
GFRA1P56159 AC233702.3-201ENST00000578656 1387 ntBASIC16.32■□□□□ 0.2
GFRA1P56159 MIR3652-201ENST00000579335 131 ntBASIC16.32■□□□□ 0.2
GFRA1P56159 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.32■□□□□ 0.2
GFRA1P56159 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
GFRA1P56159 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
GFRA1P56159 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA1P56159 AL353801.3-201ENST00000609898 542 ntBASIC16.32■□□□□ 0.2
GFRA1P56159 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
GFRA1P56159 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GFRA1P56159 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.32■□□□□ 0.2
GFRA1P56159 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA1P56159 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.31■□□□□ 0.2
GFRA1P56159 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GFRA1P56159 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA1P56159 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GFRA1P56159 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GFRA1P56159 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
GFRA1P56159 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms