Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLTCL1P53675 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC26.06■■□□□ 1.76
CLTCL1P53675 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC26.06■■□□□ 1.76
CLTCL1P53675 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLTCL1P53675 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC26.06■■□□□ 1.76
CLTCL1P53675 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLTCL1P53675 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLTCL1P53675 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CLTCL1P53675 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLTCL1P53675 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLTCL1P53675 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLTCL1P53675 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLTCL1P53675 AC093010.1-201ENST00000473625 1624 ntBASIC26.05■■□□□ 1.76
CLTCL1P53675 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CLTCL1P53675 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLTCL1P53675 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CLTCL1P53675 PNMT-203ENST00000581428 677 ntTSL 2 BASIC26.05■■□□□ 1.76
CLTCL1P53675 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC26.05■■□□□ 1.76
CLTCL1P53675 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC26.05■■□□□ 1.76
CLTCL1P53675 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
CLTCL1P53675 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CLTCL1P53675 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC26.05■■□□□ 1.76
CLTCL1P53675 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CLTCL1P53675 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CLTCL1P53675 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC26.04■■□□□ 1.76
CLTCL1P53675 CTNS-203ENST00000399306 803 ntTSL 3 BASIC26.04■■□□□ 1.76
CLTCL1P53675 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC26.04■■□□□ 1.76
CLTCL1P53675 RPS2P1-201ENST00000434010 821 ntBASIC26.04■■□□□ 1.76
CLTCL1P53675 POLD2P1-201ENST00000511220 997 ntBASIC26.04■■□□□ 1.76
CLTCL1P53675 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC26.04■■□□□ 1.76
CLTCL1P53675 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC26.04■■□□□ 1.76
CLTCL1P53675 GPALPP1-207ENST00000611650 899 ntBASIC26.04■■□□□ 1.76
CLTCL1P53675 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC26.04■■□□□ 1.76
CLTCL1P53675 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CLTCL1P53675 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC26.04■■□□□ 1.76
CLTCL1P53675 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CLTCL1P53675 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC26.04■■□□□ 1.76
CLTCL1P53675 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC26.04■■□□□ 1.76
CLTCL1P53675 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
CLTCL1P53675 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLTCL1P53675 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC26.03■■□□□ 1.76
CLTCL1P53675 KIRREL3-AS3-201ENST00000404882 831 ntBASIC26.03■■□□□ 1.76
CLTCL1P53675 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CLTCL1P53675 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC26.03■■□□□ 1.76
CLTCL1P53675 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CLTCL1P53675 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC26.03■■□□□ 1.76
CLTCL1P53675 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLTCL1P53675 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLTCL1P53675 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC26.03■■□□□ 1.76
CLTCL1P53675 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLTCL1P53675 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
CLTCL1P53675 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CLTCL1P53675 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC26.03■■□□□ 1.76
CLTCL1P53675 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC26.03■■□□□ 1.76
CLTCL1P53675 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLTCL1P53675 AC010460.3-201ENST00000511359 1579 ntBASIC26.02■■□□□ 1.76
CLTCL1P53675 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLTCL1P53675 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC26.02■■□□□ 1.76
CLTCL1P53675 AC098831.1-202ENST00000438821 336 ntBASIC26.02■■□□□ 1.76
CLTCL1P53675 PGAM5P1-201ENST00000518923 814 ntBASIC26.02■■□□□ 1.76
CLTCL1P53675 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CLTCL1P53675 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CLTCL1P53675 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
CLTCL1P53675 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLTCL1P53675 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CLTCL1P53675 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CLTCL1P53675 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC26.02■■□□□ 1.76
CLTCL1P53675 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC26.01■■□□□ 1.76
CLTCL1P53675 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLTCL1P53675 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLTCL1P53675 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLTCL1P53675 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CLTCL1P53675 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLTCL1P53675 FUOM-202ENST00000368551 628 ntTSL 3 BASIC26.01■■□□□ 1.75
CLTCL1P53675 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC26.01■■□□□ 1.75
CLTCL1P53675 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
CLTCL1P53675 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
CLTCL1P53675 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
CLTCL1P53675 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CLTCL1P53675 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC26.01■■□□□ 1.75
CLTCL1P53675 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLTCL1P53675 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC26.01■■□□□ 1.75
CLTCL1P53675 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC26.01■■□□□ 1.75
CLTCL1P53675 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLTCL1P53675 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLTCL1P53675 AC126763.1-201ENST00000552015 2118 ntBASIC26.01■■□□□ 1.75
CLTCL1P53675 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CLTCL1P53675 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CLTCL1P53675 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CLTCL1P53675 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC26■■□□□ 1.75
CLTCL1P53675 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC26■■□□□ 1.75
CLTCL1P53675 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC26■■□□□ 1.75
CLTCL1P53675 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC26■■□□□ 1.75
CLTCL1P53675 AC034105.1-201ENST00000563488 319 ntBASIC26■■□□□ 1.75
CLTCL1P53675 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC26■■□□□ 1.75
CLTCL1P53675 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC26■■□□□ 1.75
CLTCL1P53675 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CLTCL1P53675 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC26■■□□□ 1.75
CLTCL1P53675 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC26■■□□□ 1.75
CLTCL1P53675 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms