Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCNKAP51800 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCNKAP51800 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLCNKAP51800 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCNKAP51800 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLCNKAP51800 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.9■□□□□ 0.46
CLCNKAP51800 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLCNKAP51800 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CLCNKAP51800 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.9■□□□□ 0.46
CLCNKAP51800 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 CHCHD2P8-201ENST00000429873 447 ntBASIC17.9■□□□□ 0.46
CLCNKAP51800 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCNKAP51800 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.9■□□□□ 0.46
CLCNKAP51800 AC093458.2-201ENST00000623150 629 ntBASIC17.9■□□□□ 0.46
CLCNKAP51800 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCNKAP51800 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCNKAP51800 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.9■□□□□ 0.46
CLCNKAP51800 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 Z83836.1-201ENST00000624605 1642 ntBASIC17.9■□□□□ 0.46
CLCNKAP51800 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCNKAP51800 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.89■□□□□ 0.46
CLCNKAP51800 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLCNKAP51800 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLCNKAP51800 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLCNKAP51800 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCNKAP51800 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCNKAP51800 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCNKAP51800 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCNKAP51800 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCNKAP51800 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLCNKAP51800 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.89■□□□□ 0.45
CLCNKAP51800 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.89■□□□□ 0.45
CLCNKAP51800 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLCNKAP51800 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCNKAP51800 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCNKAP51800 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCNKAP51800 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCNKAP51800 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCNKAP51800 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CLCNKAP51800 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CLCNKAP51800 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CLCNKAP51800 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.88■□□□□ 0.45
CLCNKAP51800 AC090616.6-201ENST00000582640 721 ntBASIC17.88■□□□□ 0.45
CLCNKAP51800 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCNKAP51800 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLCNKAP51800 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CLCNKAP51800 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCNKAP51800 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCNKAP51800 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCNKAP51800 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLCNKAP51800 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.87■□□□□ 0.45
CLCNKAP51800 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCNKAP51800 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLCNKAP51800 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.87■□□□□ 0.45
CLCNKAP51800 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 AL024508.2-201ENST00000607749 1894 ntBASIC17.87■□□□□ 0.45
CLCNKAP51800 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCNKAP51800 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms