Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNNI2P48788 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI2P48788 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.67■■□□□ 1.06
TNNI2P48788 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI2P48788 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI2P48788 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI2P48788 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI2P48788 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.67■■□□□ 1.06
TNNI2P48788 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
TNNI2P48788 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI2P48788 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI2P48788 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TNNI2P48788 RCN1P2-201ENST00000398357 915 ntBASIC21.67■■□□□ 1.06
TNNI2P48788 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.67■■□□□ 1.06
TNNI2P48788 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.67■■□□□ 1.06
TNNI2P48788 AC073648.2-201ENST00000510116 352 ntBASIC21.67■■□□□ 1.06
TNNI2P48788 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.67■■□□□ 1.06
TNNI2P48788 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.67■■□□□ 1.06
TNNI2P48788 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TNNI2P48788 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI2P48788 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI2P48788 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TNNI2P48788 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.67■■□□□ 1.06
TNNI2P48788 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.67■■□□□ 1.06
TNNI2P48788 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNNI2P48788 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.67■■□□□ 1.06
TNNI2P48788 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.66■■□□□ 1.06
TNNI2P48788 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.66■■□□□ 1.06
TNNI2P48788 AC120498.9-201ENST00000339021 3867 ntBASIC21.66■■□□□ 1.06
TNNI2P48788 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 TP73-AS1-210ENST00000637775 1455 ntBASIC21.66■■□□□ 1.06
TNNI2P48788 AC112777.1-201ENST00000540175 1423 ntBASIC21.66■■□□□ 1.06
TNNI2P48788 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.66■■□□□ 1.06
TNNI2P48788 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 AC068472.1-201ENST00000474589 881 ntBASIC21.66■■□□□ 1.06
TNNI2P48788 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.66■■□□□ 1.06
TNNI2P48788 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.66■■□□□ 1.06
TNNI2P48788 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.66■■□□□ 1.06
TNNI2P48788 AC009533.2-201ENST00000543664 586 ntBASIC21.66■■□□□ 1.06
TNNI2P48788 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.66■■□□□ 1.06
TNNI2P48788 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
TNNI2P48788 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.66■■□□□ 1.06
TNNI2P48788 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TNNI2P48788 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.66■■□□□ 1.06
TNNI2P48788 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNNI2P48788 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.66■■□□□ 1.06
TNNI2P48788 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.65■■□□□ 1.06
TNNI2P48788 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TNNI2P48788 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI2P48788 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI2P48788 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI2P48788 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TNNI2P48788 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI2P48788 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TNNI2P48788 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.65■■□□□ 1.06
TNNI2P48788 RBM17P3-201ENST00000417687 1192 ntBASIC21.65■■□□□ 1.06
TNNI2P48788 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.65■■□□□ 1.06
TNNI2P48788 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.65■■□□□ 1.06
TNNI2P48788 RNPS1P1-201ENST00000507437 918 ntBASIC21.65■■□□□ 1.06
TNNI2P48788 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.65■■□□□ 1.06
TNNI2P48788 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.65■■□□□ 1.06
TNNI2P48788 AC005336.2-201ENST00000593183 939 ntBASIC21.65■■□□□ 1.06
TNNI2P48788 AL355877.3-201ENST00000622820 899 ntBASIC21.65■■□□□ 1.06
TNNI2P48788 AC148477.8-201ENST00000624298 468 ntBASIC21.65■■□□□ 1.06
TNNI2P48788 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI2P48788 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI2P48788 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.65■■□□□ 1.06
TNNI2P48788 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TNNI2P48788 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNNI2P48788 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.65■■□□□ 1.06
TNNI2P48788 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TNNI2P48788 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TNNI2P48788 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.64■■□□□ 1.06
TNNI2P48788 AL161938.1-201ENST00000569833 2180 ntBASIC21.64■■□□□ 1.06
TNNI2P48788 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TNNI2P48788 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.64■■□□□ 1.05
TNNI2P48788 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNNI2P48788 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNNI2P48788 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.64■■□□□ 1.05
TNNI2P48788 KRT18P13-201ENST00000400056 1290 ntBASIC21.64■■□□□ 1.05
TNNI2P48788 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.64■■□□□ 1.05
TNNI2P48788 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.64■■□□□ 1.05
TNNI2P48788 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.64■■□□□ 1.05
TNNI2P48788 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNNI2P48788 KRT18P58-201ENST00000527480 1120 ntBASIC21.64■■□□□ 1.05
TNNI2P48788 SLC25A1P1-201ENST00000528351 927 ntBASIC21.64■■□□□ 1.05
TNNI2P48788 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.64■■□□□ 1.05
TNNI2P48788 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TNNI2P48788 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.64■■□□□ 1.05
TNNI2P48788 AL049812.1-201ENST00000432563 2267 ntBASIC21.64■■□□□ 1.05
TNNI2P48788 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms