Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 COX5A-202ENST00000562233 441 ntTSL 3 BASIC32.13■■■□□ 2.73
NCAPD3P42695 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC32.13■■■□□ 2.73
NCAPD3P42695 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
NCAPD3P42695 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC32.13■■■□□ 2.73
NCAPD3P42695 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC32.13■■■□□ 2.73
NCAPD3P42695 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
NCAPD3P42695 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC32.13■■■□□ 2.73
NCAPD3P42695 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
NCAPD3P42695 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
NCAPD3P42695 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC32.12■■■□□ 2.73
NCAPD3P42695 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC32.12■■■□□ 2.73
NCAPD3P42695 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
NCAPD3P42695 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
NCAPD3P42695 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC32.12■■■□□ 2.73
NCAPD3P42695 ARTN-206ENST00000472435 402 ntTSL 3 BASIC32.12■■■□□ 2.73
NCAPD3P42695 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
NCAPD3P42695 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
NCAPD3P42695 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC32.12■■■□□ 2.73
NCAPD3P42695 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
NCAPD3P42695 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC32.12■■■□□ 2.73
NCAPD3P42695 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
NCAPD3P42695 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
NCAPD3P42695 IGHV3-65-201ENST00000523210 341 ntBASIC32.11■■■□□ 2.73
NCAPD3P42695 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC32.11■■■□□ 2.73
NCAPD3P42695 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
NCAPD3P42695 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
NCAPD3P42695 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC32.11■■■□□ 2.73
NCAPD3P42695 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
NCAPD3P42695 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
NCAPD3P42695 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC32.11■■■□□ 2.73
NCAPD3P42695 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
NCAPD3P42695 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC32.1■■■□□ 2.73
NCAPD3P42695 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
NCAPD3P42695 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
NCAPD3P42695 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC32.1■■■□□ 2.73
NCAPD3P42695 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NCAPD3P42695 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
NCAPD3P42695 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC32.1■■■□□ 2.73
NCAPD3P42695 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC32.1■■■□□ 2.73
NCAPD3P42695 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC32.1■■■□□ 2.73
NCAPD3P42695 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC32.1■■■□□ 2.73
NCAPD3P42695 MAL2-202ENST00000531508 892 ntTSL 3 BASIC32.1■■■□□ 2.73
NCAPD3P42695 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC32.1■■■□□ 2.73
NCAPD3P42695 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC32.1■■■□□ 2.73
NCAPD3P42695 AC008667.4-201ENST00000607370 168 ntBASIC32.1■■■□□ 2.73
NCAPD3P42695 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NCAPD3P42695 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NCAPD3P42695 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
NCAPD3P42695 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC32.1■■■□□ 2.73
NCAPD3P42695 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NCAPD3P42695 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NCAPD3P42695 AC122714.2-201ENST00000502787 707 ntBASIC32.1■■■□□ 2.73
NCAPD3P42695 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC32.1■■■□□ 2.73
NCAPD3P42695 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC32.1■■■□□ 2.73
NCAPD3P42695 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC32.1■■■□□ 2.73
NCAPD3P42695 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC32.1■■■□□ 2.73
NCAPD3P42695 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
NCAPD3P42695 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
NCAPD3P42695 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
NCAPD3P42695 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
NCAPD3P42695 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC32.09■■■□□ 2.73
NCAPD3P42695 AC005498.2-205ENST00000593218 784 ntBASIC32.09■■■□□ 2.73
NCAPD3P42695 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
NCAPD3P42695 AC006504.4-201ENST00000592118 1568 ntBASIC32.08■■■□□ 2.73
NCAPD3P42695 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
NCAPD3P42695 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC32.08■■■□□ 2.73
NCAPD3P42695 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
NCAPD3P42695 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
NCAPD3P42695 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
NCAPD3P42695 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
NCAPD3P42695 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
NCAPD3P42695 ADM-208ENST00000534464 1640 ntTSL 2 BASIC32.08■■■□□ 2.73
NCAPD3P42695 LINC01126-201ENST00000623515 1646 ntBASIC32.08■■■□□ 2.73
NCAPD3P42695 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC32.08■■■□□ 2.73
NCAPD3P42695 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC32.08■■■□□ 2.73
NCAPD3P42695 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
NCAPD3P42695 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC32.08■■■□□ 2.73
NCAPD3P42695 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC32.08■■■□□ 2.73
NCAPD3P42695 LSM12-202ENST00000585388 942 ntTSL 3 BASIC32.08■■■□□ 2.73
NCAPD3P42695 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC32.08■■■□□ 2.73
NCAPD3P42695 AC004817.3-201ENST00000602957 2129 ntBASIC32.08■■■□□ 2.73
NCAPD3P42695 AL513210.1-201ENST00000629608 234 ntBASIC32.08■■■□□ 2.73
NCAPD3P42695 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC32.08■■■□□ 2.73
NCAPD3P42695 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
NCAPD3P42695 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
NCAPD3P42695 AC093512.1-201ENST00000617969 520 ntBASIC32.07■■■□□ 2.72
NCAPD3P42695 CITED2-204ENST00000618718 901 ntTSL 2 BASIC32.07■■■□□ 2.72
NCAPD3P42695 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
NCAPD3P42695 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC32.07■■■□□ 2.72
NCAPD3P42695 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC32.07■■■□□ 2.72
NCAPD3P42695 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
NCAPD3P42695 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
NCAPD3P42695 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
NCAPD3P42695 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC32.06■■■□□ 2.72
NCAPD3P42695 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
NCAPD3P42695 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC32.06■■■□□ 2.72
NCAPD3P42695 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
NCAPD3P42695 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
NCAPD3P42695 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
NCAPD3P42695 MIR4751-201ENST00000578027 74 ntBASIC32.06■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms