Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.37■□□□□ 0.37
PTPN6P29350 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 KRT18P22-201ENST00000402024 1347 ntBASIC17.37■□□□□ 0.37
PTPN6P29350 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN6P29350 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PTPN6P29350 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PTPN6P29350 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN6P29350 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 AC099343.3-201ENST00000605834 2503 ntBASIC17.36■□□□□ 0.37
PTPN6P29350 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.36■□□□□ 0.37
PTPN6P29350 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN6P29350 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN6P29350 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN6P29350 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 CA15P1-201ENST00000481698 905 ntBASIC17.36■□□□□ 0.37
PTPN6P29350 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.36■□□□□ 0.37
PTPN6P29350 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.36■□□□□ 0.37
PTPN6P29350 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN6P29350 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN6P29350 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN6P29350 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN6P29350 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN6P29350 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PTPN6P29350 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.36■□□□□ 0.37
PTPN6P29350 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PTPN6P29350 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN6P29350 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN6P29350 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PTPN6P29350 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTPN6P29350 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN6P29350 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN6P29350 SLC25A1P2-201ENST00000430693 912 ntBASIC17.35■□□□□ 0.37
PTPN6P29350 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN6P29350 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN6P29350 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN6P29350 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN6P29350 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPN6P29350 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN6P29350 AC036111.1-201ENST00000533973 1582 ntBASIC17.35■□□□□ 0.37
PTPN6P29350 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN6P29350 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN6P29350 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PTPN6P29350 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN6P29350 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN6P29350 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PTPN6P29350 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN6P29350 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN6P29350 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.34■□□□□ 0.37
PTPN6P29350 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN6P29350 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PTPN6P29350 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPN6P29350 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPN6P29350 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN6P29350 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN6P29350 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN6P29350 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN6P29350 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms