Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
BCKDHBP21953 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
BCKDHBP21953 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 MED15P5-201ENST00000423150 992 ntBASIC18.03■□□□□ 0.48
BCKDHBP21953 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.03■□□□□ 0.48
BCKDHBP21953 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.03■□□□□ 0.48
BCKDHBP21953 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 AC034105.1-201ENST00000563488 319 ntBASIC18.03■□□□□ 0.48
BCKDHBP21953 AC009154.2-201ENST00000621177 724 ntBASIC18.03■□□□□ 0.48
BCKDHBP21953 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BCKDHBP21953 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 AC125634.1-201ENST00000438758 1403 ntBASIC18.03■□□□□ 0.48
BCKDHBP21953 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.03■□□□□ 0.48
BCKDHBP21953 AC007952.6-201ENST00000573168 2673 ntBASIC18.03■□□□□ 0.48
BCKDHBP21953 AC003957.1-201ENST00000625108 2673 ntBASIC18.03■□□□□ 0.48
BCKDHBP21953 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BCKDHBP21953 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
BCKDHBP21953 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BCKDHBP21953 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BCKDHBP21953 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
BCKDHBP21953 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.02■□□□□ 0.48
BCKDHBP21953 ABCD1P5-201ENST00000445663 754 ntBASIC18.02■□□□□ 0.48
BCKDHBP21953 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.02■□□□□ 0.48
BCKDHBP21953 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.02■□□□□ 0.48
BCKDHBP21953 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.02■□□□□ 0.48
BCKDHBP21953 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.02■□□□□ 0.48
BCKDHBP21953 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.02■□□□□ 0.48
BCKDHBP21953 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.02■□□□□ 0.48
BCKDHBP21953 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.02■□□□□ 0.48
BCKDHBP21953 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.02■□□□□ 0.48
BCKDHBP21953 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.02■□□□□ 0.48
BCKDHBP21953 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BCKDHBP21953 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.02■□□□□ 0.48
BCKDHBP21953 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.02■□□□□ 0.47
BCKDHBP21953 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BCKDHBP21953 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BCKDHBP21953 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
BCKDHBP21953 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
BCKDHBP21953 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
BCKDHBP21953 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BCKDHBP21953 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
BCKDHBP21953 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
BCKDHBP21953 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.02■□□□□ 0.47
BCKDHBP21953 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
BCKDHBP21953 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.01■□□□□ 0.47
BCKDHBP21953 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
BCKDHBP21953 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
BCKDHBP21953 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
BCKDHBP21953 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 OR7E14P-202ENST00000530490 1290 ntBASIC18.01■□□□□ 0.47
BCKDHBP21953 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.01■□□□□ 0.47
BCKDHBP21953 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
BCKDHBP21953 AC010327.4-202ENST00000591484 748 ntBASIC18.01■□□□□ 0.47
BCKDHBP21953 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.01■□□□□ 0.47
BCKDHBP21953 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 LINC00602-201ENST00000629776 2065 ntBASIC18.01■□□□□ 0.47
BCKDHBP21953 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.01■□□□□ 0.47
BCKDHBP21953 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 HLA-J-201ENST00000462773 1622 ntBASIC18.01■□□□□ 0.47
BCKDHBP21953 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.01■□□□□ 0.47
BCKDHBP21953 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.01■□□□□ 0.47
BCKDHBP21953 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BCKDHBP21953 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
BCKDHBP21953 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BCKDHBP21953 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
BCKDHBP21953 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BCKDHBP21953 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18■□□□□ 0.47
BCKDHBP21953 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
BCKDHBP21953 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18■□□□□ 0.47
BCKDHBP21953 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
BCKDHBP21953 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
BCKDHBP21953 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BCKDHBP21953 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
BCKDHBP21953 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18■□□□□ 0.47
BCKDHBP21953 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18■□□□□ 0.47
BCKDHBP21953 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
BCKDHBP21953 LBH-204ENST00000406087 559 ntTSL 4 BASIC18■□□□□ 0.47
BCKDHBP21953 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18■□□□□ 0.47
BCKDHBP21953 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
BCKDHBP21953 NMU-202ENST00000505262 693 ntTSL 3 BASIC18■□□□□ 0.47
BCKDHBP21953 RNA5SP415-201ENST00000517246 115 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms