Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
NCLP19338 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCLP19338 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NCLP19338 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NCLP19338 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.75■■□□□ 1.07
NCLP19338 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.75■■□□□ 1.07
NCLP19338 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.75■■□□□ 1.07
NCLP19338 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
NCLP19338 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.75■■□□□ 1.07
NCLP19338 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
NCLP19338 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.75■■□□□ 1.07
NCLP19338 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.75■■□□□ 1.07
NCLP19338 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.75■■□□□ 1.07
NCLP19338 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NCLP19338 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.75■■□□□ 1.07
NCLP19338 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCLP19338 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.75■■□□□ 1.07
NCLP19338 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.75■■□□□ 1.07
NCLP19338 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC21.74■■□□□ 1.07
NCLP19338 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.74■■□□□ 1.07
NCLP19338 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.74■■□□□ 1.07
NCLP19338 SNORA78-201ENST00000459373 127 ntBASIC21.74■■□□□ 1.07
NCLP19338 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.74■■□□□ 1.07
NCLP19338 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.74■■□□□ 1.07
NCLP19338 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.74■■□□□ 1.07
NCLP19338 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.74■■□□□ 1.07
NCLP19338 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.74■■□□□ 1.07
NCLP19338 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.74■■□□□ 1.07
NCLP19338 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
NCLP19338 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NCLP19338 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.74■■□□□ 1.07
NCLP19338 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCLP19338 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCLP19338 AC099398.1-201ENST00000567919 2776 ntBASIC21.73■■□□□ 1.07
NCLP19338 HEIH-201ENST00000623091 1652 ntBASIC21.73■■□□□ 1.07
NCLP19338 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
NCLP19338 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.73■■□□□ 1.07
NCLP19338 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCLP19338 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NCLP19338 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.73■■□□□ 1.07
NCLP19338 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NCLP19338 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.73■■□□□ 1.07
NCLP19338 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.73■■□□□ 1.07
NCLP19338 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
NCLP19338 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NCLP19338 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.73■■□□□ 1.07
NCLP19338 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCLP19338 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.73■■□□□ 1.07
NCLP19338 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCLP19338 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.73■■□□□ 1.07
NCLP19338 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NCLP19338 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCLP19338 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NCLP19338 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.73■■□□□ 1.07
NCLP19338 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.73■■□□□ 1.07
NCLP19338 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCLP19338 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.72■■□□□ 1.07
NCLP19338 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.72■■□□□ 1.07
NCLP19338 AL135905.2-201ENST00000584934 1404 ntBASIC21.72■■□□□ 1.07
NCLP19338 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NCLP19338 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCLP19338 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCLP19338 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.72■■□□□ 1.07
NCLP19338 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCLP19338 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCLP19338 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
NCLP19338 KRT8P41-201ENST00000533985 1514 ntBASIC21.72■■□□□ 1.07
NCLP19338 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.72■■□□□ 1.07
NCLP19338 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
NCLP19338 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCLP19338 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCLP19338 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.72■■□□□ 1.07
NCLP19338 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.72■■□□□ 1.07
NCLP19338 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCLP19338 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms