Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRAP04437 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRAP04437 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRAP04437 AC080080.1-201ENST00000625121 2420 ntBASIC13.94□□□□□ -0.18
TCRAP04437 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRAP04437 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TCRAP04437 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRAP04437 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TCRAP04437 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
TCRAP04437 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TCRAP04437 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRAP04437 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TCRAP04437 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRAP04437 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRAP04437 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRAP04437 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 AC006116.8-202ENST00000587620 1550 ntBASIC13.94□□□□□ -0.18
TCRAP04437 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRAP04437 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRAP04437 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRAP04437 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRAP04437 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TCRAP04437 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRAP04437 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRAP04437 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TCRAP04437 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TCRAP04437 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TCRAP04437 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TCRAP04437 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TCRAP04437 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TCRAP04437 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.93□□□□□ -0.18
TCRAP04437 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.93□□□□□ -0.18
TCRAP04437 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TCRAP04437 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.93□□□□□ -0.18
TCRAP04437 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 AC098934.4-201ENST00000564127 592 ntBASIC13.93□□□□□ -0.18
TCRAP04437 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.93□□□□□ -0.18
TCRAP04437 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.93□□□□□ -0.18
TCRAP04437 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRAP04437 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRAP04437 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRAP04437 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.93□□□□□ -0.18
TCRAP04437 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TCRAP04437 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TCRAP04437 PP12613-201ENST00000424958 2230 ntBASIC13.92□□□□□ -0.18
TCRAP04437 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 AC141586.5-201ENST00000624546 2050 ntBASIC13.92□□□□□ -0.18
TCRAP04437 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TCRAP04437 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TCRAP04437 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TCRAP04437 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRAP04437 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRAP04437 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 AC004980.1-204ENST00000429707 299 ntBASIC13.92□□□□□ -0.18
TCRAP04437 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms