Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.58■□□□□ 0.89
HMGCRP04035 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCRP04035 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCRP04035 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCRP04035 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCRP04035 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HMGCRP04035 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.58■□□□□ 0.89
HMGCRP04035 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCRP04035 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.58■□□□□ 0.89
HMGCRP04035 ABCD1P5-201ENST00000445663 754 ntBASIC20.58■□□□□ 0.89
HMGCRP04035 AC112482.1-201ENST00000492080 688 ntBASIC20.58■□□□□ 0.89
HMGCRP04035 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.58■□□□□ 0.89
HMGCRP04035 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.58■□□□□ 0.89
HMGCRP04035 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCRP04035 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
HMGCRP04035 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCRP04035 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCRP04035 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCRP04035 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
HMGCRP04035 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
HMGCRP04035 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCRP04035 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCRP04035 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCRP04035 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
HMGCRP04035 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCRP04035 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCRP04035 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGCRP04035 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCRP04035 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCRP04035 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGCRP04035 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCRP04035 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGCRP04035 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGCRP04035 AL356309.3-201ENST00000624132 1934 ntBASIC20.57■□□□□ 0.88
HMGCRP04035 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGCRP04035 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGCRP04035 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCRP04035 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCRP04035 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HMGCRP04035 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.57■□□□□ 0.88
HMGCRP04035 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCRP04035 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGCRP04035 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGCRP04035 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.57■□□□□ 0.88
HMGCRP04035 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCRP04035 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HMGCRP04035 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HMGCRP04035 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCRP04035 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGCRP04035 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCRP04035 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCRP04035 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCRP04035 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 AC093484.2-201ENST00000580996 2166 ntBASIC20.56■□□□□ 0.88
HMGCRP04035 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
HMGCRP04035 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.56■□□□□ 0.88
HMGCRP04035 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HMGCRP04035 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.56■□□□□ 0.88
HMGCRP04035 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
HMGCRP04035 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.56■□□□□ 0.88
HMGCRP04035 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.56■□□□□ 0.88
HMGCRP04035 AC025062.2-201ENST00000605477 670 ntBASIC20.56■□□□□ 0.88
HMGCRP04035 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HMGCRP04035 AC008735.5-201ENST00000623544 497 ntBASIC20.56■□□□□ 0.88
HMGCRP04035 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.56■□□□□ 0.88
HMGCRP04035 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCRP04035 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.56■□□□□ 0.88
HMGCRP04035 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HMGCRP04035 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
HMGCRP04035 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCRP04035 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCRP04035 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HMGCRP04035 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HMGCRP04035 HEIH-201ENST00000623091 1652 ntBASIC20.55■□□□□ 0.88
HMGCRP04035 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCRP04035 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGCRP04035 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGCRP04035 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCRP04035 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCRP04035 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCRP04035 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGCRP04035 MIR149-201ENST00000384879 89 ntBASIC20.55■□□□□ 0.88
HMGCRP04035 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HMGCRP04035 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGCRP04035 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.55■□□□□ 0.88
HMGCRP04035 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.55■□□□□ 0.88
HMGCRP04035 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
HMGCRP04035 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGCRP04035 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms