Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.98■□□□□ 0.95
MBD3O95983 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3O95983 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.98■□□□□ 0.95
MBD3O95983 AL121761.2-201ENST00000598007 1648 ntBASIC20.98■□□□□ 0.95
MBD3O95983 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.98■□□□□ 0.95
MBD3O95983 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.98■□□□□ 0.95
MBD3O95983 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.98■□□□□ 0.95
MBD3O95983 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.98■□□□□ 0.95
MBD3O95983 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.98■□□□□ 0.95
MBD3O95983 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3O95983 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3O95983 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3O95983 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3O95983 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3O95983 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3O95983 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3O95983 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.98■□□□□ 0.95
MBD3O95983 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3O95983 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
MBD3O95983 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3O95983 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD3O95983 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
MBD3O95983 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD3O95983 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MBD3O95983 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 TNRC18P3-201ENST00000441896 2691 ntBASIC20.97■□□□□ 0.95
MBD3O95983 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
MBD3O95983 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
MBD3O95983 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.97■□□□□ 0.95
MBD3O95983 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 MIR564-202ENST00000385049 94 ntBASIC20.97■□□□□ 0.95
MBD3O95983 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
MBD3O95983 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD3O95983 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3O95983 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD3O95983 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 NKILA-202ENST00000614771 2598 ntBASIC20.96■□□□□ 0.95
MBD3O95983 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MBD3O95983 KRT8P50-201ENST00000562022 1438 ntBASIC20.96■□□□□ 0.95
MBD3O95983 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.96■□□□□ 0.95
MBD3O95983 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MBD3O95983 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
MBD3O95983 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MBD3O95983 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.96■□□□□ 0.95
MBD3O95983 AC004980.1-204ENST00000429707 299 ntBASIC20.96■□□□□ 0.95
MBD3O95983 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.96■□□□□ 0.95
MBD3O95983 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.96■□□□□ 0.95
MBD3O95983 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.96■□□□□ 0.95
MBD3O95983 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.96■□□□□ 0.95
MBD3O95983 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.96■□□□□ 0.95
MBD3O95983 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MBD3O95983 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.96■□□□□ 0.95
MBD3O95983 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
MBD3O95983 AC093010.1-201ENST00000473625 1624 ntBASIC20.96■□□□□ 0.95
MBD3O95983 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
MBD3O95983 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.96■□□□□ 0.95
MBD3O95983 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3O95983 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.96■□□□□ 0.95
MBD3O95983 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
MBD3O95983 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
MBD3O95983 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.95■□□□□ 0.95
MBD3O95983 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
MBD3O95983 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD3O95983 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms