Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE3O75131 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE3O75131 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.55■□□□□ 0.4
CPNE3O75131 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE3O75131 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.55■□□□□ 0.4
CPNE3O75131 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.55■□□□□ 0.4
CPNE3O75131 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.55■□□□□ 0.4
CPNE3O75131 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.55■□□□□ 0.4
CPNE3O75131 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.55■□□□□ 0.4
CPNE3O75131 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CPNE3O75131 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CPNE3O75131 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.55■□□□□ 0.4
CPNE3O75131 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE3O75131 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.55■□□□□ 0.4
CPNE3O75131 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE3O75131 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE3O75131 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE3O75131 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE3O75131 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CPNE3O75131 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE3O75131 TSPY22P-201ENST00000427496 604 ntBASIC17.54■□□□□ 0.4
CPNE3O75131 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.54■□□□□ 0.4
CPNE3O75131 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.54■□□□□ 0.4
CPNE3O75131 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE3O75131 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CPNE3O75131 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE3O75131 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 AC093503.3-201ENST00000624917 2352 ntBASIC17.54■□□□□ 0.4
CPNE3O75131 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 BCL2-203ENST00000589955 5011 ntBASIC17.54■□□□□ 0.4
CPNE3O75131 HEIH-201ENST00000623091 1652 ntBASIC17.54■□□□□ 0.4
CPNE3O75131 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE3O75131 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE3O75131 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE3O75131 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPNE3O75131 Z98044.1-201ENST00000632503 1764 ntBASIC17.53■□□□□ 0.4
CPNE3O75131 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE3O75131 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE3O75131 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPNE3O75131 AL049812.1-201ENST00000432563 2267 ntBASIC17.53■□□□□ 0.4
CPNE3O75131 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE3O75131 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE3O75131 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE3O75131 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 CHCHD2P8-201ENST00000429873 447 ntBASIC17.53■□□□□ 0.4
CPNE3O75131 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.53■□□□□ 0.4
CPNE3O75131 MIR3652-201ENST00000579335 131 ntBASIC17.53■□□□□ 0.4
CPNE3O75131 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE3O75131 AL691432.3-201ENST00000621860 400 ntBASIC17.53■□□□□ 0.4
CPNE3O75131 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE3O75131 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPNE3O75131 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE3O75131 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE3O75131 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE3O75131 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE3O75131 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms