Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF4O60810 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.6■□□□□ 0.41
PRAMEF4O60810 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF4O60810 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF4O60810 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.6■□□□□ 0.41
PRAMEF4O60810 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF4O60810 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF4O60810 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.6■□□□□ 0.41
PRAMEF4O60810 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF4O60810 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEF4O60810 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.6■□□□□ 0.41
PRAMEF4O60810 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 AP000523.1-201ENST00000398242 1049 ntBASIC17.59■□□□□ 0.41
PRAMEF4O60810 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 AC139887.4-201ENST00000607877 719 ntBASIC17.59■□□□□ 0.41
PRAMEF4O60810 AC011558.1-201ENST00000623459 338 ntBASIC17.59■□□□□ 0.41
PRAMEF4O60810 AC079602.3-201ENST00000623931 403 ntBASIC17.59■□□□□ 0.41
PRAMEF4O60810 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEF4O60810 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEF4O60810 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.58■□□□□ 0.41
PRAMEF4O60810 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF4O60810 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF4O60810 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF4O60810 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.58■□□□□ 0.41
PRAMEF4O60810 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.58■□□□□ 0.41
PRAMEF4O60810 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF4O60810 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF4O60810 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.58■□□□□ 0.41
PRAMEF4O60810 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEF4O60810 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.58■□□□□ 0.4
PRAMEF4O60810 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.58■□□□□ 0.4
PRAMEF4O60810 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.58■□□□□ 0.4
PRAMEF4O60810 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 AC117947.1-201ENST00000427448 529 ntBASIC17.58■□□□□ 0.4
PRAMEF4O60810 AL137013.1-201ENST00000432946 1228 ntBASIC17.58■□□□□ 0.4
PRAMEF4O60810 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.58■□□□□ 0.4
PRAMEF4O60810 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
PRAMEF4O60810 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 AC092865.7-201ENST00000641832 219 ntBASIC17.58■□□□□ 0.4
PRAMEF4O60810 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PRAMEF4O60810 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PRAMEF4O60810 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.58■□□□□ 0.4
PRAMEF4O60810 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PRAMEF4O60810 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF4O60810 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
PRAMEF4O60810 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEF4O60810 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.57■□□□□ 0.4
PRAMEF4O60810 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PRAMEF4O60810 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF4O60810 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms