Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.82■□□□□ 0.6
TSPAN3O60637 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.82■□□□□ 0.6
TSPAN3O60637 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TSPAN3O60637 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.82■□□□□ 0.6
TSPAN3O60637 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TSPAN3O60637 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.82■□□□□ 0.6
TSPAN3O60637 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.82■□□□□ 0.6
TSPAN3O60637 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TSPAN3O60637 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.82■□□□□ 0.6
TSPAN3O60637 CLEC4GP1-201ENST00000596555 870 ntBASIC18.82■□□□□ 0.6
TSPAN3O60637 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
TSPAN3O60637 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.82■□□□□ 0.6
TSPAN3O60637 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.82■□□□□ 0.6
TSPAN3O60637 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.82■□□□□ 0.6
TSPAN3O60637 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.82■□□□□ 0.6
TSPAN3O60637 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
TSPAN3O60637 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.82■□□□□ 0.6
TSPAN3O60637 AL024508.2-201ENST00000607749 1894 ntBASIC18.82■□□□□ 0.6
TSPAN3O60637 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
TSPAN3O60637 AL353692.3-201ENST00000407031 1396 ntBASIC18.81■□□□□ 0.6
TSPAN3O60637 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.81■□□□□ 0.6
TSPAN3O60637 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.81■□□□□ 0.6
TSPAN3O60637 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TSPAN3O60637 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.81■□□□□ 0.6
TSPAN3O60637 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN3O60637 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.8■□□□□ 0.6
TSPAN3O60637 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TSPAN3O60637 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.8■□□□□ 0.6
TSPAN3O60637 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.8■□□□□ 0.6
TSPAN3O60637 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TSPAN3O60637 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.8■□□□□ 0.6
TSPAN3O60637 DUSP5P1-201ENST00000441325 1139 ntBASIC18.8■□□□□ 0.6
TSPAN3O60637 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.8■□□□□ 0.6
TSPAN3O60637 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.8■□□□□ 0.6
TSPAN3O60637 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TSPAN3O60637 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 LINC01126-201ENST00000623515 1646 ntBASIC18.8■□□□□ 0.6
TSPAN3O60637 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN3O60637 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TSPAN3O60637 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.79■□□□□ 0.6
TSPAN3O60637 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.79■□□□□ 0.6
TSPAN3O60637 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.79■□□□□ 0.6
TSPAN3O60637 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms